Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01069 ATGGCTCTCTCTTATGGCCTTTCACTTAACATCACCTTTGTATTTGCAATTCAAAATCAATGCAACATAGCAAATTATATAATATCAGTGGAGAGGCTAAATCAGTATATGCATATACCAAGTGAGGCTCCAGATGTAATAGAAGGAAATCGTCCTCCTGTGAATTGGCCAGTTGTTGGTAGAGTACAAATAAATGAATTGCAGATACGTTACAGGCCTGATGCACCACTAGTACTTCGTGGAATCACATGCACATTTGAAGGAGGGCACAAAATTGGTATTGTTGGCCGCACAGGCAGTGAGAAGTCCACTCTTATAGGTGCTTTATTCCGTCTAGTGGAGCCAGCAGCTGGAAAAATCATTGTTGATGGCATTGACATTTGTTCCATTGGCCTCCATGATTTGTGGTCGCGTTTTGGTATCATTCCTCAGGATCCTACTCTTTTTAATGGGACAGTGAGATACAATTTGGACCCCTTATCTCAACACTCTGATCAAGAGATATGGGAGGTTCTTGGGAAGTGTCAGTTGCAAGAGGCTGTCCAGGAGAAAGAAGAGCGATTAGACTCTTCAGTTGTTGAAGCTGGAGCAAACTGGAGCATGGGACAACGCCAGCTTTTCTGTTTGGGGCGTGCTCTTCTCAGGAGAAGTCGGATATTGAAAACCATTAGGACCGAGTTTGCAGATTGTACAGTGATCACAGTAGCTCACAGGATACCAACTGTGATGGATTGCACCAAGGTTCTTGCCATGAGTGATGGGAAACTGGTGGAGTATGATGAGCCAATGAAGTTGATAAAGAGAGAAGGATCGCTGTTTGGGAAGCTTGTGAACGAATACTGGTCTCATTTTCAGTCTGCAGAATCTCATTGA 873 0.4353 MALSYGLSLNITFVFAIQNQCNIANYIISVERLNQYMHIPSEAPDVIEGNRPPVNWPVVGRVQINELQIRYRPDAPLVLRGITCTFEGGHKIGIVGRTGSEKSTLIGALFRLVEPAAGKIIVDGIDICSIGLHDLWSRFGIIPQDPTLFNGTVRYNLDPLSQHSDQEIWEVLGKCQLQEAVQEKEERLDSSVVEAGANWSMGQRQLFCLGRALLRRSRILKTIRTEFADCTVITVAHRIPTVMDCTKVLAMSDGKLVEYDEPMKLIKREGSLFGKLVNEYWSHFQSAESH 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01069 290 CDD ABCC_MRP_domain2 60 262 - -
Pumo3g01069 290 Pfam ABC transporter 79 220 IPR003439 GO:0005524
Pumo3g01069 290 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 62 278 IPR003439 GO:0005524
Pumo3g01069 290 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 278 - -
Pumo3g01069 290 Gene3D - 46 279 IPR027417 -
Pumo3g01069 290 FunFam ABC transporter (MsbA subfamily) 48 277 - -
Pumo3g01069 290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 271 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01069 Pumo-Chr3 16717384 16718993 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01069 58 290 Calmodulin-binding Proteins AT2G36910 25.882 8.91e-19 84.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01069 K05666 - gmx:100811468 545.428