Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01049 ATGAGGATGAATCTCGTCGTGGCGGCGTTCGCATTCTTGTGTCTATCCACCGTGGCGCCATGGCGCGTTCTCTCGCAGCAACAGAGGCTTCTCGTGAACATGACGCTCGTTCCGAACGCTCGTGCTAGCCGCGCTCTTTGTTTGGACGGGAGTTTACCGGCGTATCACTTGCACAGAGGATTTGGAGCTGGTAAAGACAACTGGCTTCTACAATTTGAGGGAGGTGGATGGTGCAATGACTTGCAATCATGCTTGGAGAGAGCCAAAACTCGGAGGGGTTCAACACGTTATATGACCAAGTGGGGGGTGTTCTCTGGTATTTTAAGCAATAATGCCACCCTTAATCCAGATTTTTACAATTGGAACCGTGTGAAGCTGAGATATTGTGATGGAGGTTCATTTACTGGAGACGCTGTGTTCACTAACAAGACAACAACACTTCATTTCAAAGGGCAAAAGATTTGGGAAGCCATTATTTGCGACCTTCTACCACAAGGTTTGGGAAAGGCACGGAAGGCTTTGCTTTCAGGTTGTTCAGCAGGAGGTTTAGCGACCTTTCACCATTGTGACAACTTCGCCAAGTATTTGCCAACAAATGCTAGTGTTAAATGTTTGAGTGATGCTGGTTTTTTTCTTGACGAAAGAGATATCAGTTTGAATCACAGTATGAGGTTTATTTTCAAAAGTCTAGTTCAATTGCAGGGGATAGAGAAGAACCTGAATAGAAATTGTACCAGAGCACTGTACTTTCCAGACTTGTGCTTCTTTCCACAATATGCGTTGAGATACATATCAGCACCATATTTTATCTTGAACTCAGCCTACGATGTATTCCAGTTCCATCATATATTGGTGCCACCCTCTGCTGATATGCACGGACACTGGAACCACTGCAGGGTGAACCCTGCGGAGTGTACAGCAGACCAAATTGATACATTGCAAGCTTTTAGGCTCGACATGCTTGCAGCTTTGAGACCGTTTAATATGAATTCAAGAAGAGGGGGGATGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAACTGCAAGAAACATGGTTTGGGGATGATTCTCCGAGAATAAACAATAAGACTATTGCAGAAGCGGTTGGTGATTGGTATTTTAGTAGAAACATAACCAAGGAAATAGACTGTGCATATCCTTGTGATGCAACTTGTCATAATCTTATACCGTAA 1197 0.4394 MRMNLVVAAFAFLCLSTVAPWRVLSQQQRLLVNMTLVPNARASRALCLDGSLPAYHLHRGFGAGKDNWLLQFEGGGWCNDLQSCLERAKTRRGSTRYMTKWGVFSGILSNNATLNPDFYNWNRVKLRYCDGGSFTGDAVFTNKTTTLHFKGQKIWEAIICDLLPQGLGKARKALLSGCSAGGLATFHHCDNFAKYLPTNASVKCLSDAGFFLDERDISLNHSMRFIFKSLVQLQGIEKNLNRNCTRALYFPDLCFFPQYALRYISAPYFILNSAYDVFQFHHILVPPSADMHGHWNHCRVNPAECTADQIDTLQAFRLDMLAALRPFNMNSRRGGMFINSCFAHCQSELQETWFGDDSPRINNKTIAEAVGDWYFSRNITKEIDCAYPCDATCHNLIP 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01049 398 PANTHER NOTUM-RELATED 15 395 IPR004963 GO:0016787
Pumo3g01049 398 Pfam Pectinacetylesterase 25 378 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01049 Pumo-Chr3 16019493 16031531 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01049 2 398 Carbohydrate Esterase AT5G23870 65.664 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01049 K19882 - gmx:100794453 764.222