Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01048 ATGAACCTTGTCGTGGCTTTCGCATTCTCGTATCTAACCACGGTGGTGCCATGGCTGGTTCTCTCGGAACAGAGGCTTCTCGTGAACAAGACGCTGGTTAAGAACGCTGGTGCTAGCGGTGCTCTTTGTTTGGACGGGAGTTTACCGGCGTATCATTTGGGCAGAGGATTTGGAGCTGGCCAAGACAATTGGCTTCTACAATTTGAGGGAGGTGAATGGTGCAATGACCTGACATCATGCTTAGAGAGAGCCAAAACTCGGAGGGGTTCAACACTTTATATGAACAACTTGGAGGTTTTCTCCGGTATTTTAAGCAATAATGCCACCCTTAATCCAGATTTTTACAATTGGAACCGTGCAAAGCTGAGATATTGTGATGGAGCATCATTTACTGGAGACGCTATGTTCACTAACAAGACAACAACACTTTATTTCAAAGGGCAAAAGATTTGGGAAGCCATTATTCAGGACCTTCTACCACAAGGTTTGGGAAAGGCACGGAAGGCTTTGCTTTCAGGTTGTTCAGCAGGAGGTTTAGCAACTTTTCACCATTGTGACGACTTCGCTAAGTATTTGCCAACCAATGCTAGTGTTAAATGCTTGTGTGATGCCGGTTTTTTTCTTGACGAAAGAGACATCAGTATGAACTACAAGATGAGGTTTTTCTTCAAAAGTCTAGTTCAATTGCAGGGGACAGAGCAGAACCTGAATAAAAACTGTACCAACGAATTCCAAGACTTGTGCTTCTTTCCACAGTATGCGTTGAGATACATATCAACACCATATTTCATCTTGAACTCTGCCTATGATGTATACCAATTCCATCATATATTGGTGCCACCCTCTGCTGATATGCAAGGTCATTGGTCCCGTTGCAAGATGAACCCAGCAGCATGCACACCAGACAAAATTAATACATTGCAAGGTTTTAGGCTCGACATGCTTGCGGCTTTGAGACCATTCTATATGAATTCAAGCACAGGAGGGGTGTTCATAAATTCATGTTTTGCTCATTGCCAAACTGAACTGCAAGAAACATGGTTTGGGGCTGATTCTCCAAGAGTAAACAATAAGACTATTGCAGAAGCGGTTGGTGATTGGTCACTTGGAAGATTAAACTCAACATTTTTCCTCAAGCTTCTCCATTAA 1149 0.4308 MNLVVAFAFSYLTTVVPWLVLSEQRLLVNKTLVKNAGASGALCLDGSLPAYHLGRGFGAGQDNWLLQFEGGEWCNDLTSCLERAKTRRGSTLYMNNLEVFSGILSNNATLNPDFYNWNRAKLRYCDGASFTGDAMFTNKTTTLYFKGQKIWEAIIQDLLPQGLGKARKALLSGCSAGGLATFHHCDDFAKYLPTNASVKCLCDAGFFLDERDISMNYKMRFFFKSLVQLQGTEQNLNKNCTNEFQDLCFFPQYALRYISTPYFILNSAYDVYQFHHILVPPSADMQGHWSRCKMNPAACTPDKINTLQGFRLDMLAALRPFYMNSSTGGVFINSCFAHCQTELQETWFGADSPRVNNKTIAEAVGDWSLGRLNSTFFLKLLH 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01048 382 PANTHER NOTUM-RELATED 18 371 IPR004963 GO:0016787
Pumo3g01048 382 Pfam Pectinacetylesterase 22 371 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01048 Pumo-Chr3 16009415 16014705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01048 1 371 Carbohydrate Esterase AT5G23870 63.636 0.0 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01048 K19882 - gmx:100802358 636.336