Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01041 ATGGGTAGCATCGTGGAAGACGCCGACACCGACACAGTGTACGTGGCGGTCGGAAAGAACGCCGAGAAGACGCAACAATTGTTGCATTGGACGGTTGATAATTTCTCTGGCAAAGAAATTTGCCTTCTTCATATTCACCAACCTCACTCTCTCAATTCCTTCACAGACAGAAATCTCTCTGGGTATGAACCAAAAGACCATGCAATCAAGGCATTCCAGGAGCATGGAAATCAAACAGTGCACGAACTTCTAGACCAATACATTCTCACTCTGGTCCCAGCAGGGGTACGGGCCTATAAATTGTTGATTGAGATGGATGATATTGAGAAAGGGATCGCAAAAGCTATTGCACAACACAATATTAGATGGCTTGTAATGGGAGCAGCAGCAGACGGATATAACTTGGGCAAACTGGCTAAGCAAGAGTCGGAGAAAGCTATTTTTGTACGTGAACGAGCATTGCTATCCTGTAATATTTGGTTCATTTGCAAGGGCAACCTCATATGTACTAGGGTATATAGTGAGCATACTTCTGACATAGAGACTGGCCATGCATTGTTGGTGCTCAATCCAAATACAGAAGTCAAGCAATCAGGAAAGATTAAATCAGAACCGATACCTGATGATGCATTGAAATATTTAGATTTCTGCAGATTCTGA 660 0.4318 MGSIVEDADTDTVYVAVGKNAEKTQQLLHWTVDNFSGKEICLLHIHQPHSLNSFTDRNLSGYEPKDHAIKAFQEHGNQTVHELLDQYILTLVPAGVRAYKLLIEMDDIEKGIAKAIAQHNIRWLVMGAAADGYNLGKLAKQESEKAIFVRERALLSCNIWFICKGNLICTRVYSEHTSDIETGHALLVLNPNTEVKQSGKIKSEPIPDDALKYLDFCRF 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01041 219 PANTHER OS02G0152300 PROTEIN 13 175 - -
Pumo3g01041 219 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 15 129 - -
Pumo3g01041 219 CDD STK_N 12 165 - -
Pumo3g01041 219 Gene3D HUPs 5 136 IPR014729 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01041 Pumo-Chr3 15928186 15932853 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01041 11 171 U-box Gene Family AT2G45910 41.615 7.22e-37 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01041 - - gmx:100787938 400.208