Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01032 ATGCTTACATGGTTGGGAAAATCATCATCAAGAGATACCAAGAAGAAAGCAAATAAGGAAAGTTTTTTTGACACACTGCACCGAAAACTTAAAATTTCATCTGAAGGTAAAGTAAGCATTAGATCTGGAGGATCCCGTGGACATTGCAATGACACAATTTCAGAGAAGGGGGATCATTCTCCATCCGAATCAAGATCACCTTCACCTTCCAAAGTGGCAAGGTGTCAAAGTTTTGTTGATAGGCCTAATAATGCTCAGCCACTTCCACTTCCTGGTCTGCACCCTTCAAGTGTAGGTCGAGTAGATTCCGAAATTAGCATATCATCAAAACCAAGATTGGAAAAAGTCTCCAAGCCATCATTGTTTCTTCCGCTTCCAACACCTGCATGCATACGTTGTAAGCCAAACCCTGCAGATTTGGATGGAGATATGGTCATTGCTTCAGTCTTTAGTGATTTCTCTGCTGACAGTGATGAGCCGGCAGACTCACACAATCGTAGTCCTCTAGCAACTGACTGTGAGACTGGGACTAGAACTGCTGCTGGCAGTCCTTCCAGCTTGATGCTCAAGGATCAACCACCTGCTGTTTCCCAACTGAATTCAACAGGAGTACAGAACCCAGGAAATATTCTAAGTAATCATACATCTTCTACTTCACCAAAACGTAGGCCTTTACGCAACCATGTTCCAAATCTTCAGGTTCCTCCTCATGGTGCCTTCTATAGTGCTCCTGATAGTTCCTTGTCAAGTCCATCAAGAAGTCCATTGAGAGCATTTAGCACAGATCAGGTGTTGAATTCAGCTTTTTGCGCTGGAAAGCCATATTCAGAGGTCAATTTTGTTGGATCTGGGCATTGCTCTAGTCCAGGTTCAGGTCACAATTCTGGGCATAATTCAATGGGAGGGGACATGTCAGGACCGTTGTTTTGGCAACCAAGCAGGGGTAGCCCCGAGTATTCTCCAGTACCTAGTCCCAGAATGACTAGCCCTGGTCCAAGCTCTAGAATTCAGAGTGGAGCAGTCACACCTATTCATCCCAAAGCCGGGGGAACACCCACTGAATCACAGACTCATCGTTTGCCTCTTCCTCCCTTGTCAGTTTCTAATTCCTCACCGTTCTCTCATTCAAATTCTGCAGCAACATCTCCGTCTATGCCAAGAAGTCCAGCTAGAGCAGATAATCCAAGCTCTGGCTCACGTTGGAAGAAAGGGAAGCTGCTTGGCAGCGGCTCATTTGGACATGTCTATCTTGGCTTCAATAGTGAAAGTGGCGAAATGTGTGCAGTGAAGGAAGTTACCCTGTTTTCAGATGATCCCAAGTCTATGGAAAGTGCTAAGCAATTTATGCAGGAAATTCATTTATTAAGCCGTTTACAGCATCCAAATATTGTCCGGTATTATGGTTCTGAAACAGTTGATGACAAGCTTTACATATACCTTGAGTATGTATCTGGAGGCTCCATACATAAACTTCTTAGAGAATATGGGCAATTTGGTGAACTAGTTATTCGTAGTTATACTCAACAAATTTTGTCAGGGCTTGCTTATTTGCATGCTAAAAATACTCTCCATAGGGACATCAAAGGAGCAAATATACTGGTAGATCCAACTGGTCGAGTCAAGTTGGCAGACTTTGGCATGGCAAAACATATAACAGGGCAATCATGTCCATTGTCATTCAAGGGAACCCCTTACTGGATGGCTCCTGAGGTTATAAAGAACTCTAATGGATGCAACCTTGCGGTGGATATATGGAGTCTTGGATGCACAGTTTTGGAAATGGCTACGACCAAACCTCCTTGGTTTCAGTATGAAGGGGTCGCTGCCATGTTCAAGATTGGTAATAGCAAGGAACTCCCAACAATCCCTGATCATCTCTCAAATGAAGGAAAAGATTTTGTTAGGAAATGTCTTCAGCGTAACCCACATGATCGCCCTTCAGCCAGTGAATTGTTGGAGCACCCTTTTGTAAAAAACGCTGCACCTTTGGAAAGACCTATTCTGGCTGCTGAAGCATTGGACCCTGTTTCTGGGATTACACGGGGAGCAAAAGCTCTGGTATATAAAATATTTCTAACATAA 2082 0.438 MLTWLGKSSSRDTKKKANKESFFDTLHRKLKISSEGKVSIRSGGSRGHCNDTISEKGDHSPSESRSPSPSKVARCQSFVDRPNNAQPLPLPGLHPSSVGRVDSEISISSKPRLEKVSKPSLFLPLPTPACIRCKPNPADLDGDMVIASVFSDFSADSDEPADSHNRSPLATDCETGTRTAAGSPSSLMLKDQPPAVSQLNSTGVQNPGNILSNHTSSTSPKRRPLRNHVPNLQVPPHGAFYSAPDSSLSSPSRSPLRAFSTDQVLNSAFCAGKPYSEVNFVGSGHCSSPGSGHNSGHNSMGGDMSGPLFWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPKAGGTPTESQTHRLPLPPLSVSNSSPFSHSNSAATSPSMPRSPARADNPSSGSRWKKGKLLGSGSFGHVYLGFNSESGEMCAVKEVTLFSDDPKSMESAKQFMQEIHLLSRLQHPNIVRYYGSETVDDKLYIYLEYVSGGSIHKLLREYGQFGELVIRSYTQQILSGLAYLHAKNTLHRDIKGANILVDPTGRVKLADFGMAKHITGQSCPLSFKGTPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWFQYEGVAAMFKIGNSKELPTIPDHLSNEGKDFVRKCLQRNPHDRPSASELLEHPFVKNAAPLERPILAAEALDPVSGITRGAKALVYKIFLT 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01032 693 SUPERFAMILY Protein kinase-like (PK-like) 384 668 IPR011009 -
Pumo3g01032 693 PRINTS Tyrosine kinase catalytic domain signature 582 604 IPR001245 GO:0004672|GO:0006468
Pumo3g01032 693 PRINTS Tyrosine kinase catalytic domain signature 626 648 IPR001245 GO:0004672|GO:0006468
Pumo3g01032 693 PRINTS Tyrosine kinase catalytic domain signature 516 534 IPR001245 GO:0004672|GO:0006468
Pumo3g01032 693 PRINTS Tyrosine kinase catalytic domain signature 480 493 IPR001245 GO:0004672|GO:0006468
Pumo3g01032 693 ProSitePatterns Protein kinases ATP-binding region signature. 407 430 IPR017441 GO:0005524
Pumo3g01032 693 CDD STKc_MEKK1_plant 400 657 - -
Pumo3g01032 693 MobiDBLite consensus disorder prediction 34 103 - -
Pumo3g01032 693 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 59 665 - -
Pumo3g01032 693 MobiDBLite consensus disorder prediction 1 21 - -
Pumo3g01032 693 MobiDBLite consensus disorder prediction 286 301 - -
Pumo3g01032 693 Gene3D Transferase(Phosphotransferase) domain 1 398 674 - -
Pumo3g01032 693 MobiDBLite consensus disorder prediction 349 395 - -
Pumo3g01032 693 SMART serkin_6 401 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01032 693 MobiDBLite consensus disorder prediction 286 402 - -
Pumo3g01032 693 FunFam Mitogen-activated protein kinase kinase kinase 399 681 - -
Pumo3g01032 693 ProSiteProfiles Protein kinase domain profile. 401 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01032 693 MobiDBLite consensus disorder prediction 63 83 - -
Pumo3g01032 693 MobiDBLite consensus disorder prediction 155 256 - -
Pumo3g01032 693 Pfam Protein kinase domain 402 657 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g01032 693 MobiDBLite consensus disorder prediction 168 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01032 Pumo-Chr3 15813291 15818316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01032 2 681 MAP Kinase Kinase Kinase AT1G63700 64.368 0.0 771
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pumo3g01032 Pkinase 5.8e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01032 K20717 - gmx:100797994 1230.7