Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01023 ATGTCGTCGCCGGGGTTCCCAGGTGGTGCAGCCTCCGATTTCTACGGCGGAGCAGGAGGATTTCCTAGTCAATCCATGGCGGTTCAATCCACCATGAACAACCACCCGAACCTCCACCCTCTCTACCGATCCCAACCTTCAATTTTGCTTAACCCCTCGTCCCACATCGCCCAACACCAAACATCCACCCTCATCGGGAAACGCACCCTAGCCGAATTCCAAACCCACAACCTTAACAACAACAACAACAACCTTAACCTTATTCACAACAACAATAACCCACTCCTGTCAAACTATCTACTTCGCTCTGTGAAGCCCAGAACTTTCCAACACACGAATTTCTCCACTTCCACTCCTGAATTATCCACCCTTCCGTCACATCGTTACGGCGTGCCGGTTCTCCACCACCTTCGCCCGAACGCGGTTAACGCACAACCCATCACCACGAATTCGATACTCCCTAACACAAACAATTTCCCTCCGGTTCACCACAGACTAACCGCACCCCACGAACCGGAGAAGAACTTAATAGACCGCCGCCTCCAGGAGTTGGAAAAGCAGCTTCTAGAAGACAATGATGAAGAGCAAGGCGACGCCGTTTCGGTCATTACCACCACCACCTCCGAATGGTCACACACAATACAAAACTTAATCACTCCGCAGAAACCCGCGTCGTCGTCTCCCACTTCCTCTACGACGTCGTCTAACTCCTCCGTAGAATCCATCTGCTCCAAACAGTCCCTAACGGAGGCCGCAACCGCGATTTCAGAAGGGAGGTTCGAGGCCGCCACGGAGATCCTAGCCCGATTATCGCAGAATTCGGATCAACGCTTCGTCAATTGCATGGTTTCCGCACTCAAATCGCGGATGAATCACGTCGAGTATCCACCGCCGGTTGCGGAATTGTTCGGCAGCGAACACGCCGAGTCGACTCAGTCGCTCTTCGAACACTCGCTCTTCTTCAAGGTCGCGCGCATGGTCGCCAACATCGCAATTCTCGAATCCGCATTAACCGAGAACGCGAAACTCTGCGTGGTGGATTTCGATATCGGAGACGGGAACCAATACGTGAGTCTTCTCCACGAGCTTTCCGCGCGGCGGAAGGGCGCTCCGGCCGCCGTGAAGATCGTCGCGGTGGCGGAGAACGCCGCCGACAAGAGGCTGAAAACCGTGGGTGTGTTGCTGGGAAGACGCGCGGAGAAAGTAGGGATTGGTTTCGAATTCAAAGTGCTGACTCGGAGAATCACCGAGTTGACTCGCGAGTCGCTGGGTTGCGACGCGGACGAGGCGCTGGCGGTGAACTTTGCGTTTACGCTTTACAAAATGCCTGACGAGAGCGTCTCCACGGAGAACCCGCGCGACGAGCTTCTGCGGCGCGTGAAGGCACTCGCGCCGCGCGTGGTGACGCTGGTGGAGCAGGAGGCGAACACCAATACGGCGCCGTTCGTGGCTCGCGTGTCCGAGTTATGTGCGTATTACGGCACGCTGTTTGACTCGCTCGAGTCGACGATGGCGCGGGAGAACTCTGAGCGAGTTAAGATCGAGGAGGGACTGAGTCGGAAGGTGGGGAACTCGGTGGCGTGCGAAGGAAGGGACCGCGTGGAACGGTGTGAGGTGTTTGGGAAGTGGCGCGCGCGTATGAGCATGGCTGGGTTCAGGTTGAAACCGCTGAGTCAGCGAGTCGCTGAGTCGATCAAAGCGCGACTCGGTGGTGCTGGGAACCGAGTCGCGGTAAAAGTAGAGAACGGTGGGATTTGCTTTGGTTGGATGGCAAGAACTCTCACTGTCGCATCTGCTTGGTGTTAA 1806 0.5598 MSSPGFPGGAASDFYGGAGGFPSQSMAVQSTMNNHPNLHPLYRSQPSILLNPSSHIAQHQTSTLIGKRTLAEFQTHNLNNNNNNLNLIHNNNNPLLSNYLLRSVKPRTFQHTNFSTSTPELSTLPSHRYGVPVLHHLRPNAVNAQPITTNSILPNTNNFPPVHHRLTAPHEPEKNLIDRRLQELEKQLLEDNDEEQGDAVSVITTTTSEWSHTIQNLITPQKPASSSPTSSTTSSNSSVESICSKQSLTEAATAISEGRFEAATEILARLSQNSDQRFVNCMVSALKSRMNHVEYPPPVAELFGSEHAESTQSLFEHSLFFKVARMVANIAILESALTENAKLCVVDFDIGDGNQYVSLLHELSARRKGAPAAVKIVAVAENAADKRLKTVGVLLGRRAEKVGIGFEFKVLTRRITELTRESLGCDADEALAVNFAFTLYKMPDESVSTENPRDELLRRVKALAPRVVTLVEQEANTNTAPFVARVSELCAYYGTLFDSLESTMARENSERVKIEEGLSRKVGNSVACEGRDRVERCEVFGKWRARMSMAGFRLKPLSQRVAESIKARLGGAGNRVAVKVENGGICFGWMARTLTVASAWC 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01023 601 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 225 589 IPR005202 -
Pumo3g01023 601 ProSiteProfiles GRAS family profile. 235 601 IPR005202 -
Pumo3g01023 601 Coils Coil 174 194 - -
Pumo3g01023 601 MobiDBLite consensus disorder prediction 26 45 - -
Pumo3g01023 601 MobiDBLite consensus disorder prediction 218 243 - -
Pumo3g01023 601 Pfam GRAS domain family 245 600 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01023 Pumo-Chr3 15710893 15712915 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01023 33 600 GRAS Transcription Factor Family AT5G52510 47.161 3.44e-153 453
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pumo3g01023 GRAS 2.7e-93 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01023 - - gmx:100800097 949.118