Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g01013 ATGTTTCCATCACAGCACAATCCGAACAAGAATGAGTGGCTTCACCCTTTGCGTCCTCATGGAGGATCCCAAACGGAACCTCCAGATCAAAACGGACCAAGAACAAGAACAAGAAGAAGAAGTGAATCCTCAAGCACGAATGGCAGAGAAATTGGCCGAGAAAGAAGTCCCAGAGGTTCACTTATCTCGTTGCAGGCTGTCATGTCTAGCTTTGGCATCACCTCTATGGCAGTCTTCGCCGTTTATTATAGATTCTCCTGGCAAATGGAGGGTGGAGATGTTCCTTGGTCTGAAATGTTAGGCACATTTTCCCTCTCCGTCGGTGCTGCTGTGGCTATGGAGTTTTGGGCAAGATGGGCTCATAGAGCTCTTTGGCATGCTTCCTTGTGGCACATGCACGAGTCACACCATCGACCAAGAGAGGGACCATTCGAGCTTAACGACGTTTTTGCGATAATTAATGCTGTCCCTGCGATCGCGCTACTCTCATACGGTTTTTTCCACAAGGGTCTGGTTCCTGGCCTCTGTTTTGGTGCAGGCCTTGGAATCACGGTGTTTGGGATGGCGTATATGTTTGTCCACGATGGATTGGTTCACAAGAGATTCCCTGTGGGTCCCATTGCCAACGTGCCCTACTTCAGAAGAGTTGCTGCTGCTCACCAACTTCACCATTCGGACAAATTCAACGGGGTGCCATATGGGCTGTTTTTGGGACCAAAGGAAGTTGAAGAAGTGGGAGGGCTAGAAGAGCTAGAGAAAGAGATAGTTTCAGATAACTCATGTAGGGAGATATCCCTTCTTAACAACCAGGTGCCGGATAACTTTGTTAAGGTTTTGGATGTTCCCACTCCTCCACCCTCCCCTGTGTTGCAGCAGCCGATTAGGATCACGGCAGTGAACGAGGAAACTCCTCTTCTAGAAGCCTCGGATACCACAAATAATGGGGATAATGAGGTAGTCTCTGCACTTTGGGCAGATATGGTAGACAAGGATAATGGGGGTGACCTCTGTTTGGAAAATATGCAAGAAGTTCCCATTGAGCTCGTCTCTAGCTTCCAGGAGGTTATCTCTAAGTCACAAAAGAAAAAAATGAAAAAGCAAAATAAGCTCTCAACTGACAAAGGGAGCAAGAATTCACCCTTAGGGGCAACACACAAAGCATCATCCTCATGA 1173 0.4766 MFPSQHNPNKNEWLHPLRPHGGSQTEPPDQNGPRTRTRRRSESSSTNGREIGRERSPRGSLISLQAVMSSFGITSMAVFAVYYRFSWQMEGGDVPWSEMLGTFSLSVGAAVAMEFWARWAHRALWHASLWHMHESHHRPREGPFELNDVFAIINAVPAIALLSYGFFHKGLVPGLCFGAGLGITVFGMAYMFVHDGLVHKRFPVGPIANVPYFRRVAAAHQLHHSDKFNGVPYGLFLGPKEVEEVGGLEELEKEIVSDNSCREISLLNNQVPDNFVKVLDVPTPPPSPVLQQPIRITAVNEETPLLEASDTTNNGDNEVVSALWADMVDKDNGGDLCLENMQEVPIELVSSFQEVISKSQKKKMKKQNKLSTDKGSKNSPLGATHKASSS 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g01013 390 MobiDBLite consensus disorder prediction 357 390 - -
Pumo3g01013 390 Pfam Fatty acid hydroxylase 109 236 IPR006694 GO:0005506|GO:0008610|GO:0016491
Pumo3g01013 390 MobiDBLite consensus disorder prediction 373 390 - -
Pumo3g01013 390 MobiDBLite consensus disorder prediction 32 56 - -
Pumo3g01013 390 MobiDBLite consensus disorder prediction 1 57 - -
Pumo3g01013 390 PANTHER BETA-CAROTENE 3-HYDROXYLASE 1, CHLOROPLASTIC 49 258 IPR045019 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g01013 Pumo-Chr3 15623486 15636690 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g01013 25 179 Chloroplast and Mitochondria Gene Families AT4G25700 65.663 1.70e-71 221
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g01013 K15746 - gmx:100802778 382.489