Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00997 ATGCGCAACGTGGTCTTCACCCTCTCTCCCAACTTCATCCATTTCCCGGTGGTCTGCCTCGCCGTCATGTCCCTCAGCGCCATCATCACCACCACCAACCCCCTCAACACCACGTGCGAAATCGCCAAGCAGATCGCCGATTCCAAGCCCCTCCTCACCTTCACAGTCCCTCCTTTACTCCCCAAAATCATCGCAACAGTGCCCTCTCTACCAATCGTTCTCATGGACGAGGACAAGGACAACCACGCCAACAACTCCAACGCTAAAATTGTCACCACACTCGAAGAGATGGCGAAGAAGGAACCCGAGTCTCGACGCGTGAGGGAGTGCGTGGAGCAGGACGACATGGGCACGCTGCTCTACTCCTTCGGCACCACGAGACCTTCATCTGCACGGTCCCCATGTTTCACATTCACATATACGGTCTGGTGGCCTTCGCGACGGGGCTTTTGGCTTTGGGGTCCACCATCGTAG 474 0.5675 MRNVVFTLSPNFIHFPVVCLAVMSLSAIITTTNPLNTTCEIAKQIADSKPLLTFTVPPLLPKIIATVPSLPIVLMDEDKDNHANNSNAKIVTTLEEMAKKEPESRRVRECVEQDDMGTLLYSFGTTRPSSARSPCFTFTYTVWWPSRRGFWLWGPPS 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00997 157 Gene3D - 4 126 - -
Pumo3g00997 157 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 3 126 - -
Pumo3g00997 157 SUPERFAMILY Acetyl-CoA synthetase-like 3 126 - -
Pumo3g00997 157 Pfam AMP-binding enzyme 4 126 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00997 Pumo-Chr3 15360739 15361212 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00997 3 131 Monolignol Biosynthesis Gene Families AT1G20510 60.465 5.50e-42 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00997 K10526 - gmx:100811344 172.17