Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00995 ATGCAGAGGAAATACGGATGTCCCAGAAAAGAACCATATTTTAAAAGGTCCATATCTGAGGTGACTATGGAGCGAGTTTCTGGTTTGTTTGGTTCCTTGTCAGTCCTTCCTTCAACAGGCAGAATTAGAGGTACACTACGTCGACAGAGTAGTGGAACTGAAAATTCCAGCAATCCTCCAAAGCTTCGTAGGAATGCCACTACTGCATGTGATACGATTAGCACTTCCGAATATGGTCCATCTGATCCACCTCCTTTGAAGTGCACAAGCGGCTTCTGTTTTGATGAAAAGCTCTTTGTGCAGTCACTTTATAAGGTCTTGGTTTCTATCTCAGAAACCAGTTCCGTTATTTTATACATCAAGGATGTCGAGAAGCTCTTTGTTCGATCACCAAGGCTACACAATTTGTTCCAAAATTTAATAAAGAAACTTTCAGGATCAGTGTTAATACTCGGTTCCCAGATCTTTGATTCTGCAGATGATTGCACAGAAATTGATGAAAAGCTTACTATGTTATTCCCTTACAATATTGAGATCAAACCACCTCAAGATGAGACCCATCTTGCCAAACTGAAAAAGGAGATGGAAACAATTCTGTTTCAGGATAGCAGGAACCACATTGCTGAAGTACTTGCAGCAAATGACATTGATTGTGATGACTTGGAAAAAGTCCACCATGCTGACACTATGCTACTCAGTAATTGCATTGAAGAGATTGTGGCTTTGTGCCATGTATTGAGTCTGTTCCAGGAAAGTGAAAGTAATCCAGAGAATAAAGATTCAAACAAGGACGATGCTCCCGCAACAAAGAAAGATGGCGACAATAATGCTCCTGACAATGAGTTTGAGAAGCGCATGAGAGCAGAAGTTGTGCCTGCAAATGAGATAGGGGTTACATTTGAAGATATTGGTGCATTGGATGATATTAAAGAATTACTTCAAGATGTGGTCATGCTTCCCCTCAGAAGGCCAGACTTATTCAAAGGTGGGCTTCTGAAGCCTTATAAAGGAATATTGCTTTTTGGGCCTCCCGGTACAGGAAAAACAATGCTTGCAAAGGCAATTGCAAACGAAGCTGGAGCAAGTTTCATTAATGTCTCAATCTCTAATATCACTTCAAAATGGTTTGGAGAAGATGAAAAGAATGTCCGAGCTCTGTTTTCACTAGCAGCAAAGGTTGCTCCAACTATTATTTTTATTGATGAGATTGATAGCATGCTTGGGCAGTGGACTAAATATGGAGAGCATGAGGCAATGAGAAAGATTAAAAATGAATTCATGGCCCCCTGGCCATTTGACCTTGATGAAGCAATTATAAGACGGTTTGAGCGCAGAAGGATCATGGTTGGTCTTCCATCCGCTGAGAACAGGGAAATGATATTGAAAACTCTCCTAGCTAAAGAAAAATATGAAAATATAGACTTTAAAGAGCTTTCCACCATGACAGAAGGATATACTGGAAGTGATCTTAAGAATTTGTGCACGGCTGCTGCTTATCGACCTGTTAGAGAGCTACTACAACAGGAGAGGTTGAAGGAAAAGGAAAAGAAGAAAACGGAGGCAGAAGTTCAAAGATCAGAAAATGCTTCTGATGCAAAAAGTGATAAAGACGACCAAGTGATTACTTTGAGGCCTTTAAACATGGAAGACATGAGACAGGCAAAGAGTCAGGAATAA 1677 0.4043 MQRKYGCPRKEPYFKRSISEVTMERVSGLFGSLSVLPSTGRIRGTLRRQSSGTENSSNPPKLRRNATTACDTISTSEYGPSDPPPLKCTSGFCFDEKLFVQSLYKVLVSISETSSVILYIKDVEKLFVRSPRLHNLFQNLIKKLSGSVLILGSQIFDSADDCTEIDEKLTMLFPYNIEIKPPQDETHLAKLKKEMETILFQDSRNHIAEVLAANDIDCDDLEKVHHADTMLLSNCIEEIVALCHVLSLFQESESNPENKDSNKDDAPATKKDGDNNAPDNEFEKRMRAEVVPANEIGVTFEDIGALDDIKELLQDVVMLPLRRPDLFKGGLLKPYKGILLFGPPGTGKTMLAKAIANEAGASFINVSISNITSKWFGEDEKNVRALFSLAAKVAPTIIFIDEIDSMLGQWTKYGEHEAMRKIKNEFMAPWPFDLDEAIIRRFERRRIMVGLPSAENREMILKTLLAKEKYENIDFKELSTMTEGYTGSDLKNLCTAAAYRPVRELLQQERLKEKEKKKTEAEVQRSENASDAKSDKDDQVITLRPLNMEDMRQAKSQE 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00995 558 Pfam AAA+ lid domain 472 508 IPR041569 -
Pumo3g00995 558 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 86 557 - -
Pumo3g00995 558 MobiDBLite consensus disorder prediction 256 281 - -
Pumo3g00995 558 MobiDBLite consensus disorder prediction 253 281 - -
Pumo3g00995 558 Pfam ATPase family associated with various cellular activities (AAA) 338 427 IPR003959 GO:0005524|GO:0016887
Pumo3g00995 558 Coils Coil 502 529 - -
Pumo3g00995 558 Gene3D - 431 452 IPR027417 -
Pumo3g00995 558 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 298 520 IPR027417 -
Pumo3g00995 558 SMART AAA_5 334 453 IPR003593 GO:0016887
Pumo3g00995 558 MobiDBLite consensus disorder prediction 44 66 - -
Pumo3g00995 558 Gene3D - 453 543 - -
Pumo3g00995 558 MobiDBLite consensus disorder prediction 511 558 - -
Pumo3g00995 558 Gene3D - 297 429 IPR027417 -
Pumo3g00995 558 MobiDBLite consensus disorder prediction 511 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00995 Pumo-Chr3 15260381 15264844 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00995 298 553 Calmodulin-binding Proteins AT3G56690 33.813 1.94e-36 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00995 - - gmx:100793760 919.457