Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00974 ATGGTCATTGCTTCAGTCTTTAGTGATTTCTCTGCTGACAGTGATGAGCCGGCAGACTCACACAATCGTAGTCCTCTAGCAACTGACTGTGAGACTGGGACTAGAACTGCTGCTGGCAGTCCCTTCCAGCTTGATGCTCAAGGATCACCACCTGCTGTTTCCCAACTGAATTCAACAGGAGTACAGAACCCAGGAAATATTCTAAGTAATCATACATCTTCTACTTCACCAAAACGTAGGCCTTTACGCAACCATGTTCCAAATCTTCAGGTTCCTCCTCATGGTGCCTTCTATAGTGCTCCTGATAGTTCCTTGTCAAGTCCATCAAGAAGTCCATTGAGAGCATTTAGCACAGATCAGGTGTTGAATTCAGCTTTTTGCGCTGGAAAGCCATATTCAGAGGTCAATTTTGTTGGATCTGGGCATTGCTCTAGTCCAGGTTCAGGTCACAATTCTGGGCATAATTCAATGGGAGGGGACATGTCAGGACCGTTGTTTTGGCAACCAAGCAGGGGTAGCCCTGAGTATTCTCCAGTACCTAGTCCCAGAATGACTAGCCCTGGTCCAAGCTCTAGAATTCAGAGTGGAGCAGTCACACCTATTCATCCCAAAGCCGGGGGAACACCCACTGAATCACAGACTCATCGTTTGCCTCTTCCTCCCTTGTCAGTTTCTAATTCCTCACCGTTCTCTCATTCAAATTCAGCAGCAACATCTCCGTCTATGCCAAGAAGTCCAGCTAGAGCAGATAATCCAAGCTCTGGCTCACGTTGGAAGAAAGGGAAGCTGCTTGGCAGCGGCTCATTTGGACATGTCTATCTTGGCTTCAATAGTGAAAGTGGCGAAATGTGTGCAGTGAAGGAAGTTACCCTGTTTTCAGATGATCCCAAGTCTATGGAAAGTGCTAAGCAATTTATGCAGGAAATTCATTTATTAAGCCGTTTACAGCATCCAAATATTGTCCGGTATTATGGTTCTGAAACAGTTGATGACAAGCTTTACATATACCTTGAGTATGTATCTGGAGGCTCCATACATAAACTTCTTAGAGAATATGGGCAATTTGGTGAACTAGTTATTCGTAGTTATACTCAACAAATTTTGTCAGGGCTTGCTTATTTGCATGCTAAAAATACTCTCCATAGGGACATCAAAGGAGCAAATATACTGGTAGATCCAACTGGTCGAGTCAAGTTGGCAGACTTTGGCATGGCAAAACATATAACAGGGCAATCATGTCCATTGTCATTCAAGGGAACCCCTTACTGGATGGCTCCTGAGGTTATAAAGAACTCTAATGGATGCAACCTTGCGGTGGATATATGGAGTCTTGGATGCACAGTTTTGGAAATGGCTACGACCAAACCTCCTTGGTTTCAGTATGAAGGGGTCGCTGCCATGTTCAAGATTGGTAATAGCAAGGAACTCCCAACAATCCCTGATCATCTCTCAAATGAAGGAAAAGATTTTGTTAGGAAATGTCTTCAGCGTAACCCACATGATCGCCCTTCAGCCAGTGAATTGTTGGAGCACCCTTTTGTAAAAAACGCTGCACCTTTGGAAAGACCTATTCTGGCTGCTGAAGCATTGGACCCTGTTTCTGGGATTACACGGGGAGCAAAAGCTCTGGTATATAAAATATTTCTAACATAA 1653 0.4434 MVIASVFSDFSADSDEPADSHNRSPLATDCETGTRTAAGSPFQLDAQGSPPAVSQLNSTGVQNPGNILSNHTSSTSPKRRPLRNHVPNLQVPPHGAFYSAPDSSLSSPSRSPLRAFSTDQVLNSAFCAGKPYSEVNFVGSGHCSSPGSGHNSGHNSMGGDMSGPLFWQPSRGSPEYSPVPSPRMTSPGPSSRIQSGAVTPIHPKAGGTPTESQTHRLPLPPLSVSNSSPFSHSNSAATSPSMPRSPARADNPSSGSRWKKGKLLGSGSFGHVYLGFNSESGEMCAVKEVTLFSDDPKSMESAKQFMQEIHLLSRLQHPNIVRYYGSETVDDKLYIYLEYVSGGSIHKLLREYGQFGELVIRSYTQQILSGLAYLHAKNTLHRDIKGANILVDPTGRVKLADFGMAKHITGQSCPLSFKGTPYWMAPEVIKNSNGCNLAVDIWSLGCTVLEMATTKPPWFQYEGVAAMFKIGNSKELPTIPDHLSNEGKDFVRKCLQRNPHDRPSASELLEHPFVKNAAPLERPILAAEALDPVSGITRGAKALVYKIFLT 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00974 550 ProSiteProfiles Protein kinase domain profile. 258 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00974 550 MobiDBLite consensus disorder prediction 143 259 - -
Pumo3g00974 550 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 49 522 - -
Pumo3g00974 550 SUPERFAMILY Protein kinase-like (PK-like) 241 525 IPR011009 -
Pumo3g00974 550 MobiDBLite consensus disorder prediction 25 81 - -
Pumo3g00974 550 SMART serkin_6 258 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00974 550 MobiDBLite consensus disorder prediction 1 111 - -
Pumo3g00974 550 CDD STKc_MEKK1_plant 257 514 - -
Pumo3g00974 550 FunFam Mitogen-activated protein kinase kinase kinase 256 538 - -
Pumo3g00974 550 ProSitePatterns Protein kinases ATP-binding region signature. 264 287 IPR017441 GO:0005524
Pumo3g00974 550 Pfam Protein kinase domain 259 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00974 550 Gene3D Transferase(Phosphotransferase) domain 1 255 531 - -
Pumo3g00974 550 PRINTS Tyrosine kinase catalytic domain signature 373 391 IPR001245 GO:0004672|GO:0006468
Pumo3g00974 550 PRINTS Tyrosine kinase catalytic domain signature 439 461 IPR001245 GO:0004672|GO:0006468
Pumo3g00974 550 PRINTS Tyrosine kinase catalytic domain signature 337 350 IPR001245 GO:0004672|GO:0006468
Pumo3g00974 550 PRINTS Tyrosine kinase catalytic domain signature 483 505 IPR001245 GO:0004672|GO:0006468
Pumo3g00974 550 MobiDBLite consensus disorder prediction 206 252 - -
Pumo3g00974 550 MobiDBLite consensus disorder prediction 143 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00974 Pumo-Chr3 14934602 14939002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00974 15 538 MAP Kinase Kinase Kinase AT1G63700 70.130 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pumo3g00974 Pkinase 3.4e-74 CL0016