Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00961 ATGGCTCCCAAACAGCCTAGCACGGGTCTGTTTGTTGGACTGAACAAGGGTCACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCGGATCGTAAGGGGAAAACAAGTAAGAGGGTGCACTTTGTGAGGAACCTCATACGAGAGGTTGCTGGTTTTGCACCTTATGAAAAGCGTATAACTGAGTTGCTCAAGGTTGGGAAAGATAAGAGGGCACTCAAGGTTGCAAAGAGAAAGCTTGGAACCCACAAACGTGCAAAGAAGAAGCGTGAGGAGATGTCCAATGTTCTCCGCAAGATGAGGGCTGGTGGAGCTGGTGACAAGAAGAAATAA 333 0.4955 MAPKQPSTGLFVGLNKGHVVTKKELPPRPSDRKGKTSKRVHFVRNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKKKREEMSNVLRKMRAGGAGDKKK 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00961 110 PANTHER 60S RIBOSOMAL PROTEIN L36 1 108 IPR000509 GO:0003735|GO:0005840|GO:0006412
Pumo3g00961 110 FunFam 60S ribosomal protein L36 1 106 - -
Pumo3g00961 110 MobiDBLite consensus disorder prediction 79 110 - -
Pumo3g00961 110 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
Pumo3g00961 110 Gene3D 60S ribosomal protein L36 1 108 IPR038097 -
Pumo3g00961 110 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Pumo3g00961 110 MobiDBLite consensus disorder prediction 1 38 - -
Pumo3g00961 110 MobiDBLite consensus disorder prediction 87 110 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00961 Pumo-Chr3 14807845 14809718 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00961 7 110 Cytoplasmic Ribosomal Protein Gene Family AT5G02450 84.615 6.56e-59 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00961 K02920 - gmx:100526979 218.394
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00961 3 14807845 14809718 Pumo3g00961 3 14807845 14809718 ECH