Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00958 ATGAACCTTGTCGTGGCTTTCGCATTCTCGTATCTAACCACGGTGGTGCCATGGCTGGTTCTCTCGGAACAGAGGCTTCTCGTGAACAAGACGCTGGTTAAGAACGCTAGAGCTAGCGGTGCTCTTTGTTTGGACGGGAGTTTACCGGCGTATCATTTGGACAGAGGATTTGGAGCTGGCCAAGACAATTGGCTTCTACAATTTGAGGGAGGTGAATGGTGCAATGACCTGACATCATGCTTAGAGAGAGCCAAAACTCGGAGGGGTTCAACACTTTATATGAACAACTTGGAGGTTTTCTCCGGTATTTTAAGCAATAATGCCACCCTTAATCCAGATTTTTACAATTGGAACCGTGCAAAGCTGAGATATTGTGATGGAGCATCATTTACTGGAGACGCTATGTTCACTAACAAGACAACAACACTTTATTTCAAAGGGCAAAAGATTTGGGAAGCCATTATTCAGGACCTTCTACCACAAGGTTTGGGAAAGGCACGGAAGGCTTTGCTTTCAGGTTGTTCAGCAGGAGGTTTAGCAACTTTTCACCATTGTGACGACTTCGCTAAGTATTTGCCAACCAATGCTAGTGTTAAATGCTTGAGTGATGCCGGTTTTTTTCTTGACGAAAGAGACATCAGTATGAACTACAAGATGAGGTTTTTCTTCAAAAGTCTAGTTCAATTGCAGGTAAGGAAAATTATACAATATTTTGACGTTTGTCTTGTTTCCATGCAGTGCTTCTTTCCACAGTATGCGTTGAGATACATATCAACACCATATTTCATCTTGAACTCTGCCTATGATGTATACCAATTCCATCATATATTGGTGCCACCCTCTGCTGATATGCAAGGTCATTGGTCCCGTTGCAAGATGAACCCAGCAGCATGCACACCAGACAAAATTAATACATTGCAAGGTTTTAGGCTCGACATGCTTGCGGCTTTGAGACCGTTCTATATGAATTCAAGCACAGGAGGGGTGTTCATAAATTCATGTTTTGCTCATTGCCAAACTGAACTGCAAGAAACATGGTTTGGGGCTGATTCTCCAAGAGTAAACAATAAGACTATTGCAGAAGCGGTTGGTGATTGGTCACTTGGAAGATTAAACTCAACATTTTTCCTCAAGCTTCTCCATTAA 1146 0.425 MNLVVAFAFSYLTTVVPWLVLSEQRLLVNKTLVKNARASGALCLDGSLPAYHLDRGFGAGQDNWLLQFEGGEWCNDLTSCLERAKTRRGSTLYMNNLEVFSGILSNNATLNPDFYNWNRAKLRYCDGASFTGDAMFTNKTTTLYFKGQKIWEAIIQDLLPQGLGKARKALLSGCSAGGLATFHHCDDFAKYLPTNASVKCLSDAGFFLDERDISMNYKMRFFFKSLVQLQVRKIIQYFDVCLVSMQCFFPQYALRYISTPYFILNSAYDVYQFHHILVPPSADMQGHWSRCKMNPAACTPDKINTLQGFRLDMLAALRPFYMNSSTGGVFINSCFAHCQTELQETWFGADSPRVNNKTIAEAVGDWSLGRLNSTFFLKLLH 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00958 381 PANTHER NOTUM-RELATED 18 370 IPR004963 GO:0016787
Pumo3g00958 381 Pfam Pectinacetylesterase 22 370 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00958 Pumo-Chr3 14736628 14742515 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00958 1 370 Carbohydrate Esterase AT5G23870 62.500 2.04e-176 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00958 K19882 - gmx:100802358 610.142