Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00956 ATGGAGTTTCTAGGGCTATGTGGGGTTCTTGTTGCCTTCTCGGCAGCACTTTGCCTCTTCTTGTTCTTGATACTAACGTTTTATTGGTGGGTTTTCCCTACCCAAACACTTAAGAAGCTTAAGAAATGTGGGTTGGGAGGGCCAACCCCAAGTTTTCCCCTTGGAAACATTGAAGAGATGAAAAGAAAGAATAGCATTCAATCTTCAGTTGTATCCTCAAATTTCTCACACGATATACACTCCAACGTTTTTCCCTACTTTTCCAGCTGGCAGAAATCACATGGTAAGGTTTTCGTGTACTGGTTGGGCACGGAGCCTTTTTTGTACGTTGCAGAGCCAGATTTCTTGAAGAAAATGTCAACAGTGGTGATGGCCAAGAGTTGGGGAAAACCAAGTGTGTTTAAAACTGACAGAGACCCCATGTTTGGGAGTGGTTTGGTTATGGTTGAGGGCAATGATTGGGTTCGTCACAGACACATTGTTGCTCCCGCATTCAATCCCATTAATTTGAAGGCCATGGCAAACATGATGGTTGAATCTACGAATCAAATGATAGATAGATGGGCTACCCAAATAAACTCCGGCAACACCGAATTCGATGTGGAAAAGGAGATTATAGCAACAGCTGGAGAGATCATAGCAAGAACAAGCTTTGGAATGAAAGACGACAATGCAAGAGATGCCATTTCAAAATTACGAGCCTTGCAAATGACTCTCTTTAAGACCAATCGGTATGTGGGGGTTCCCTTTGGCAAGTATTTCAATGTCAAGAAAACCTTAGAGGCCAAGAAACTCGGGAAAGAAATCGATGAGCTCTTGTTGTCCATCATAGAAGCTCGGAAGAATTCATCCACAAAGAATTCTCAACAAGACTTGTTAGGTTTGTTGCTTCAAGGCAACCATCAGGGTAATGGCCGGTCAGGAAAGACATTAACATCGCGAGAAGTGGTTGATGAATGCAAGACCTTCTTCTTCGGAGGCCATGAAACCACAGCACTTGCCATCACATGGACTTTGTTGCTTTTAGCCATGCATGAAGATTGGCAAAACCAGTTGAGAGATGAGATACGAGAAGTGGTGGGTGGTGATGACAAGCTTGATATCACTTTGCTCTCTGGTTTAAAGAAGATGAAGTGTGTAATGAATGAAGTTCTAAGACTATACCCACCATCACCGAATGTGCAAAGGCAAGCAAGGGAAGACATTAAAGTTGATGATATAACAGTGCCTAATGGAACCAACATGTGGATAGATGTGGTAGCGATGCACCACGACCCTGAATTATGGGGAAAGGATGCGAATGAGTTCAGACCAGAGAGGTTCATGGATGATGTGAATGGTGGGTGCAACCACAAGATGGGGTACTTGCCTTTTGGGTTTGGAGGGAGGATGTGTGTTGGTAGGAACTTGACCTTTATGGAGTACAAGATTGTGTTAACTCTGCTTCTCTCTAAGTTTAGATTTAAGCTTTCCCCAGGTTACCATCATTCACCATCTATCATGCTCTCCCTAAGGCCAAGGCTATGTGGGGTTCTTGTTGCCTTCTCGGCAGCACTTTGCCTCTTCTTGTTCTTGATACTAACGTTTTATTGGTGGGTTTTCCCTACCCAAACACTTAAGAAGCTTAAGAAATGTGGGTTGGGAGGGCCAACCCCAAGTTTTCCCCTTGGAAACATTGAAGAGATGAAAAGAAAGAATAGCATTCAATCTTCAGTTGTATCCTCAAATTTCTCACACGATATACACTCCAACGTTTTTCCCTACTTTTCCAGCTGGCAGAAATCACATGGTAAGGTTTTCGTCTACTGGTTGGGCACGGAGCCTTTTTTGTACGTTGCAGAGCCAGAGTTCTTGAAGAAAATGTCAACAGTGGTGATGGCCAAGAGTTGGGGAAAACCAAGTGTGTTTAAAACTGACAGAGACCCCATGTTTGGGAGTGGTTTGGTTATGGTTGAGGGCAATGATTGGGTTCGTCACAGACACATTGTTGCTCCCGCATTCAATCCCATTAATTTGAAGGCCATGGCAAACATGATGGTTGAATCTACGAATCAAATGATAGATAGATGGGCTACCCAAATAAACTCCGGCAACCCCGAATTCGATGTGGAAAAGGAGATTATAGCAACAGCTGGAGAGATCATAGCAAGAACAAGCTTTGGAATGAAAGACGACAATGCAAGAGATGCCATTTCTAAATTACGAGCCTTGCAAATGACTCTCTTTAAGACCAATCGGTATGTGGGGGTTCCCTTTGGCAAGTATTTCAATGTCAAGAAAACCTTAGAGGCCAAGAAACTCGGGAAAGAAATCGATGAGCTCTTGTTGTCCATCATAGAAGCTCGGAAGAATTCATCCACAAAGAATTCTCAACAAGACTTGTTAGGTTTGTTGCTTCAAGGCAACCATCAGGGTGATGGCCGGTCAGGAAAGACATTAACATCGCGAGAAGTCGTTGATGAATGCAAGACCTTCTTCTTCGGAGGCCATGAAACCACAGCACTTGCCATCACATGGACTTTGTTGCTTTTAGCCATGCATGAAGATTGGCAAAACCAGTTGAGAGATGAGATACGAGAAGTGGTGGGTGGTGATGACAAGCTTGATATCACTTTGCTCTCTGGTTTAAAGAAGATGAAATGGGTTATGAATGAAGTCCTAAGACTATACCCACCAGCACCAAATGTGCAAAGGCAAGCAAGAGAAGACATTAAAGTTGATGACATCACAGTGCCTAATGGAACCAACTTGTGGATCGATGTGGTAGCGATGCACCACGACCCCGAAGTATGGGGAAAGGATGCAAATGAGTTCAGACCAGAGAGGTTCATGAATGATGTGAATGGTGGGTGCAACCACAAGATGGGGTACTTGCCATTTGGGTTTGGAGGGAGAATGTGTGTTGGAAGGAACTTGACCTTTATGGAGTACAAGGTTGTGTTAACCCTGCTTCTCTCTAGGTTTAGTTTTAAGCTTTCACCAGGTTACAATCATTCACCATCTATTATGCTATCCCTAAGGCCAAGTCAAGGACTTCCACTCATAGTTCATCCCCTTTAG 3060 0.4369 MEFLGLCGVLVAFSAALCLFLFLILTFYWWVFPTQTLKKLKKCGLGGPTPSFPLGNIEEMKRKNSIQSSVVSSNFSHDIHSNVFPYFSSWQKSHGKVFVYWLGTEPFLYVAEPDFLKKMSTVVMAKSWGKPSVFKTDRDPMFGSGLVMVEGNDWVRHRHIVAPAFNPINLKAMANMMVESTNQMIDRWATQINSGNTEFDVEKEIIATAGEIIARTSFGMKDDNARDAISKLRALQMTLFKTNRYVGVPFGKYFNVKKTLEAKKLGKEIDELLLSIIEARKNSSTKNSQQDLLGLLLQGNHQGNGRSGKTLTSREVVDECKTFFFGGHETTALAITWTLLLLAMHEDWQNQLRDEIREVVGGDDKLDITLLSGLKKMKCVMNEVLRLYPPSPNVQRQAREDIKVDDITVPNGTNMWIDVVAMHHDPELWGKDANEFRPERFMDDVNGGCNHKMGYLPFGFGGRMCVGRNLTFMEYKIVLTLLLSKFRFKLSPGYHHSPSIMLSLRPRLCGVLVAFSAALCLFLFLILTFYWWVFPTQTLKKLKKCGLGGPTPSFPLGNIEEMKRKNSIQSSVVSSNFSHDIHSNVFPYFSSWQKSHGKVFVYWLGTEPFLYVAEPEFLKKMSTVVMAKSWGKPSVFKTDRDPMFGSGLVMVEGNDWVRHRHIVAPAFNPINLKAMANMMVESTNQMIDRWATQINSGNPEFDVEKEIIATAGEIIARTSFGMKDDNARDAISKLRALQMTLFKTNRYVGVPFGKYFNVKKTLEAKKLGKEIDELLLSIIEARKNSSTKNSQQDLLGLLLQGNHQGDGRSGKTLTSREVVDECKTFFFGGHETTALAITWTLLLLAMHEDWQNQLRDEIREVVGGDDKLDITLLSGLKKMKWVMNEVLRLYPPAPNVQRQAREDIKVDDITVPNGTNLWIDVVAMHHDPEVWGKDANEFRPERFMNDVNGGCNHKMGYLPFGFGGRMCVGRNLTFMEYKVVLTLLLSRFSFKLSPGYNHSPSIMLSLRPSQGLPLIVHPL 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00956 1019 Coils Coil 262 282 - -
Pumo3g00956 1019 FunFam Cytochrome P450 734A1 531 1019 - -
Pumo3g00956 1019 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 960 969 IPR017972 GO:0005506|GO:0016705
Pumo3g00956 1019 Coils Coil 764 784 - -
Pumo3g00956 1019 SUPERFAMILY Cytochrome P450 80 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00956 1019 SUPERFAMILY Cytochrome P450 582 1018 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00956 1019 Pfam Cytochrome P450 582 1002 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00956 1019 Pfam Cytochrome P450 80 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00956 1019 PRINTS P450 superfamily signature 465 476 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00956 1019 PRINTS P450 superfamily signature 456 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00956 1019 PRINTS P450 superfamily signature 326 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00956 1019 PRINTS P450 superfamily signature 379 390 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00956 1019 PANTHER CYTOCHROME P450 FAMILY MEMBER 523 1008 - -
Pumo3g00956 1019 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 458 467 IPR017972 GO:0005506|GO:0016705
Pumo3g00956 1019 PRINTS E-class P450 group I signature 419 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00956 1019 PRINTS E-class P450 group I signature 335 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00956 1019 PRINTS E-class P450 group I signature 465 488 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00956 1019 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00956 1019 PRINTS E-class P450 group I signature 455 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00956 1019 PRINTS E-class P450 group I signature 315 332 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00956 1019 Gene3D Cytochrome P450 28 509 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pumo3g00956 1019 Gene3D Cytochrome P450 530 1019 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00956 Pumo-Chr3 14651950 14686069 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00956 1 506 Cytochrome P450 AT5G52400 59.302 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00956 - - gmx:100803409 942.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00956 3 14651950 14686069 Pumo3g00956 3 14651950 14686069 ECH