Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00939 ATGTTGAGGCCATTTGTGCCGTCCTCGGTGCCCGATACTGCTATGTTAGCTCCTGAGGAGTTATTTGATGGCAACGGTGATATCAAGGAAGGAGCAGAGCTTACAATGGCAAAAAGGAAAAGGAGAGAACCAGTGGGAATTGCCAAGGCATTAGCAGTGAAGAACGGGGACCAGTTGGATTCAATCAAGAGTGTCCTTGTAGATAATCAAGAAAGAGATTCTGGAAGCATGTACACAGATTGCGACATCCTTCCTCCAAGGAAAATCAAGGATGTCAATGGCTCAATGCAAAAAAGGTTATTAGGCTCATATGAGGAGTTCCTTCTTCCAGGGGAAGTTATAATGGAACAAGGGAATGATGTAGATCAACTATATTTTGTCTGTCATGGAATGCTTGTGTGA 402 0.4353 MLRPFVPSSVPDTAMLAPEELFDGNGDIKEGAELTMAKRKRREPVGIAKALAVKNGDQLDSIKSVLVDNQERDSGSMYTDCDILPPRKIKDVNGSMQKRLLGSYEEFLLPGEVIMEQGNDVDQLYFVCHGMLV 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00939 133 ProSiteProfiles cAMP/cGMP binding motif profile. 107 133 IPR000595 -
Pumo3g00939 133 SUPERFAMILY cAMP-binding domain-like 102 132 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00939 Pumo-Chr3 14475240 14477477 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00939 104 132 Ion Channels AT3G02850 82.759 2.31e-11 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00939 K08057 K21867 cpap:110809747 64.6994