Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00914 ATGGCTGAAATGGAAACCTTGGGCAAGGTGAAGCATCAAAATCTTGTAGCATTGCTCGGATATTGCTCAATCGGTGAGGAGAAACTCCTTGTTTACGAATATATGGTAAATGGGAGCTTAGATCTTTGGTTGAGAAATAGGACTGGGGCCCTTGAAATCCTTGACTGGAACAAACGTTACAAAATTGCAACCGGAGCAGCTCGAGGATTAGCTTTCCTTCACCATGGTTTCATACCTCACATCATTCACAGGGATGTTAAAGCTAGCAACATCTTACTCAGTGAAGATTTTGAGCCAAAGGTTGCAGACTTTGGACTGGCAAGACTGATCAGTGCCTGTGAGACTCATATCACCACTGATATTGCTGGAACATTTGGCTACATTCCACCAGAGTATGGGCAGAGTGGGAGATCCACAACAAGAGGAGATGTCTACAGTTTTGGTGTCATTTTGCTTGAACTGGTGACTGGGAAAGAGCCAACAGGACCAGATTTTAAAGAGATTGAAGGTGGGAACTTGGTTGGATGGGTTAGTCAGAAGATCAAGAAGGGGCAGGCTGCTGATGTTCTTGACCCAACAGTTCTTGATGCTGACTCAAAGCAGATGATGCTTCAAATGCTGCAAATTGCTTGTGTATGCATATCTGATAATCCTGCAAACAGGCCTACCATGCTTCAAGTGCACAAATTCTTGAAGGGGATGAAGGGAGAGTAG 714 0.444 MAEMETLGKVKHQNLVALLGYCSIGEEKLLVYEYMVNGSLDLWLRNRTGALEILDWNKRYKIATGAARGLAFLHHGFIPHIIHRDVKASNILLSEDFEPKVADFGLARLISACETHITTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPDFKEIEGGNLVGWVSQKIKKGQAADVLDPTVLDADSKQMMLQMLQIACVCISDNPANRPTMLQVHKFLKGMKGE 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00914 237 FunFam serine/threonine-protein kinase BRI1-like 2 35 237 - -
Pumo3g00914 237 SUPERFAMILY Protein kinase-like (PK-like) 2 231 IPR011009 -
Pumo3g00914 237 Gene3D Phosphorylase Kinase; domain 1 1 35 - -
Pumo3g00914 237 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 2 235 - -
Pumo3g00914 237 SMART serkin_6 1 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00914 237 Gene3D Transferase(Phosphotransferase) domain 1 36 237 - -
Pumo3g00914 237 PIRSF ILK 1 237 - -
Pumo3g00914 237 ProSitePatterns Serine/Threonine protein kinases active-site signature. 81 93 IPR008271 GO:0004672|GO:0006468
Pumo3g00914 237 ProSiteProfiles Protein kinase domain profile. 1 231 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00914 237 Pfam Protein tyrosine and serine/threonine kinase 1 231 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00914 Pumo-Chr3 14204345 14205058 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00914 1 232 Receptor kinase-like Gene Family AT5G07280 77.586 1.58e-126 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pumo3g00914 PK_Tyr_Ser-Thr 1.1e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00914 - - gmx:100808726 473.396