Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00908 ATGTATGCAGGAACAAGTCACTCCCGCCGCCGCCGCCGCCCCTCCGCCGTCACCCACTTTGATTCCTCAACTCCCTTGGACGCCAACAAGCATGCCATCGCCGTCGCCGCCGCCACCGCCGCCGTAGCAGAAGCCGCTCTTGCCGCCGCCCATGCCGCTGCCGAGGTTGTCAGGCTCACAAGCGGCGGCGGCGGCGCCGCCACAAGTACCAGCACCAGGCCCGCTGCGGCGCCGGCGCGTGTTGGCAACCTCCGGTTGCTGGAGGAGACCGCCGCCGTTAAGATACAATCGGCTTTCCGGGGTTACTTGGCAAGGAGGGCATTGAGAGCACTTAAAGCATTGGTGAAGTTGCAAGCATTGGTTAGGGGCCACATTGTGAGAAAGCAAAGTGCTGATATGCTCAGGCGCATGCAAACATTGGTGCGACTTCAGGCCCAGGCACGTGCAAGCCGTGCGCACTTTTCAGATAATATTACGCCTTCTTTCAAGTCTTCCCTTTCTCACTACCCTGTCCCTGAAGAATATGAGCACCCACCTCGTGCCTTCAGTACAAAATTTGATGGATCTTCTATCCTTAAGAGATGTAGTTCCAATGCCAACTTTAGAAACGTTGACTCAGAACGCACCCGGTTTGACTCCAATTGGTTAAACCGTTGGATGGAATTAGATAACAAGTGCAGCCAAACTGGAGATGCTTCATTGAAAAATGGACGCCCTGATGATGATAAAACTGACAAGATTCTCGAAGTAGATACTTGGAGGCCACACTTCAAGTCCCACCACAGTAGCAGCAGCTCCTTTCAAGCAGCACATTATTATTTGAGTTCTGATTACAATAATAATGAGAACTTTGCAGCACATGAGTCTCCATCAAAACGTTCAGCAAAGGCTCTAAACCAAAGTTTCTCATCGAGGGAGTTGTTGCAGCTAAGCTCTTTGAAGTTTCACAAAGGAAAAGAAGAAGCAAGTTCAAGAACTGCTGACAATAGTCCACAAGCATTTTCTGCCAATTCTAGAAATGGAAGTGGTGCAAGGAGAGGTGGTCCTTTTACACCTACCAGGAGTGAGTGTTCGTGGGGATTCTTCAGTGGCTACTCGGGTCACCCCAATTACATGGCAAACACTGAATCTTTTAGGGCTAAGGTTAGATCACAAAGTGCACCAAGACAAAGGTTGGAGTTTGACAGATACGGTTCCACTAGGAGGCCTGTTCATGTGGTAGGGCCTATTTCAGACCAGGATTCAGATTTAAGGAACAAAGTCTTACCTGCCTCTAACCAAATGAACAGGATTGGGAGTAGCAATTTAAGGTGA 1314 0.5 MYAGTSHSRRRRRPSAVTHFDSSTPLDANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTSGGGGAATSTSTRPAAAPARVGNLRLLEETAAVKIQSAFRGYLARRALRALKALVKLQALVRGHIVRKQSADMLRRMQTLVRLQAQARASRAHFSDNITPSFKSSLSHYPVPEEYEHPPRAFSTKFDGSSILKRCSSNANFRNVDSERTRFDSNWLNRWMELDNKCSQTGDASLKNGRPDDDKTDKILEVDTWRPHFKSHHSSSSSFQAAHYYLSSDYNNNENFAAHESPSKRSAKALNQSFSSRELLQLSSLKFHKGKEEASSRTADNSPQAFSANSRNGSGARRGGPFTPTRSECSWGFFSGYSGHPNYMANTESFRAKVRSQSAPRQRLEFDRYGSTRRPVHVVGPISDQDSDLRNKVLPASNQMNRIGSSNLR 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00908 437 MobiDBLite consensus disorder prediction 325 344 - -
Pumo3g00908 437 Pfam Protein of unknown function (DUF4005) 330 392 IPR025064 -
Pumo3g00908 437 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 89 133 IPR027417 -
Pumo3g00908 437 MobiDBLite consensus disorder prediction 318 351 - -
Pumo3g00908 437 Pfam IQ calmodulin-binding motif 112 129 IPR000048 GO:0005515
Pumo3g00908 437 Pfam IQ calmodulin-binding motif 91 109 IPR000048 GO:0005515
Pumo3g00908 437 PANTHER IQ-DOMAIN 5-RELATED 12 410 - -
Pumo3g00908 437 Gene3D - 88 140 - -
Pumo3g00908 437 SMART iq_5 87 109 IPR000048 GO:0005515
Pumo3g00908 437 SMART iq_5 110 131 IPR000048 GO:0005515
Pumo3g00908 437 ProSiteProfiles IQ motif profile. 88 116 IPR000048 GO:0005515
Pumo3g00908 437 ProSiteProfiles IQ motif profile. 112 139 IPR000048 GO:0005515
Pumo3g00908 437 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00908 Pumo-Chr3 14112409 14118223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00908 26 393 IQD Protein Family AT5G62070 47.059 4.88e-55 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00908 - - gmx:100783694 638.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00908 3 14112409 14118223 Pumo3g00908 3 14112409 14118223 ECH
Pumo6g02624 6 62543925 62550355 Pumo3g00908 3 14112409 14118223 PCT