Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00883 ATGCATCTTTTCATGAAGTTCTCATCCAAGCCTCATTTTCAAAGTACAATAATTCTGATTTATCAGATGGCCCCTCTGCCAGCAGAAAACATCTTTCCAATCATTTTCCTCCTCTTGACAATATTTACAGTATCCAAAGCTGAACTTCATGCTCATTACTACGACCAAACATGTCCACAAGTGGAAAAAATAATTTCAGAGACTGTTCTCAAAGCTTCTAAGCATGACCCAAAAGTCCCAGCTCGTATCTTGAGAATGTTCTTCCATGACTGTTTCATAAGGGGGTGTGATGCATCAATATTGTTGGACTCAACAGCCACTAACCAAGCTGAGAAAGATGGCCCTCCTAATATCTCAGTTCGATCGTTCTATGTGATTGATGAAGCCAAAGCAAAGCTTGAATTGGCTTGCCCACACACTGTTTCTTGTGCTGATATAATTGCCATTTCAGCTAGAGATGTGGTAGCCATGTCTGGAGGTCCAAATTGGAATGTACCAAAAGGAAGGAAAGATGGAAGAGTATCAAAGGCATCTGATACCATCAACTTACCCTCTCCAACCTCCAATGTGAGCCAACTAATTCAGAGCTTTGCTAAGAGAGGTTTGACAGTTAAAGATTTAGTAACTTTATCTGGAGGTCACACTCTAGGCTTTTCACATTGTTCTTCCTTTGAGGCACGTCTTCGTAATTTTAGTTCATTGCATGACACTGATCCAAGTATGAAAACCGAGTTTGCTTTAGACCTAAGAAAGAAATGTCCAAAACCAAATCACAACCGCAATGCAGGACAGTTCCTGGACTCAACAGCATCAGTGTTTGACAATGACTATTACAAACAACTGTTGGCTGGAAAAGGTGTGTTTTTTTCAGATCAATCACTTGTTGGTGATCACAGGACTAAATGGTTTGTTGAAGCATTTGCAAAAGACCAGGGTTTGTTCTTCAAAGAGTTCACAGCTTCAATGTTGAAACTTGGACACTTAAGAGGCTCTAAAAATGGGGAAGTGAGACTTAATTGCAGGATTGTGAATTGA 1035 0.401 MHLFMKFSSKPHFQSTIILIYQMAPLPAENIFPIIFLLLTIFTVSKAELHAHYYDQTCPQVEKIISETVLKASKHDPKVPARILRMFFHDCFIRGCDASILLDSTATNQAEKDGPPNISVRSFYVIDEAKAKLELACPHTVSCADIIAISARDVVAMSGGPNWNVPKGRKDGRVSKASDTINLPSPTSNVSQLIQSFAKRGLTVKDLVTLSGGHTLGFSHCSSFEARLRNFSSLHDTDPSMKTEFALDLRKKCPKPNHNRNAGQFLDSTASVFDNDYYKQLLAGKGVFFSDQSLVGDHRTKWFVEAFAKDQGLFFKEFTASMLKLGHLRGSKNGEVRLNCRIVN 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00883 344 Pfam Peroxidase 68 310 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g00883 344 PRINTS Haem peroxidase superfamily signature 159 171 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g00883 344 PRINTS Haem peroxidase superfamily signature 206 221 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g00883 344 PRINTS Haem peroxidase superfamily signature 80 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g00883 344 PRINTS Haem peroxidase superfamily signature 141 158 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g00883 344 PRINTS Haem peroxidase superfamily signature 266 281 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g00883 344 SUPERFAMILY Heme-dependent peroxidases 49 344 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pumo3g00883 344 ProSiteProfiles Plant heme peroxidase family profile. 48 344 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pumo3g00883 344 CDD secretory_peroxidase 48 343 IPR033905 GO:0004601|GO:0042744
Pumo3g00883 344 FunFam Peroxidase 52 195 - -
Pumo3g00883 344 Gene3D - 52 344 - -
Pumo3g00883 344 ProSitePatterns Peroxidases proximal heme-ligand signature. 206 216 IPR019793 -
Pumo3g00883 344 PRINTS Plant peroxidase signature 82 102 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g00883 344 PRINTS Plant peroxidase signature 121 134 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g00883 344 PRINTS Plant peroxidase signature 140 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g00883 344 PRINTS Plant peroxidase signature 280 297 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g00883 344 PRINTS Plant peroxidase signature 264 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g00883 344 PRINTS Plant peroxidase signature 320 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g00883 344 PRINTS Plant peroxidase signature 159 174 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g00883 344 PRINTS Plant peroxidase signature 205 217 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g00883 344 PRINTS Plant peroxidase signature 58 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g00883 344 PANTHER PEROXIDASE 25-RELATED 39 330 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pumo3g00883 344 Gene3D Peroxidase, domain 2 184 325 - -
Pumo3g00883 344 FunFam Peroxidase 184 325 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00883 Pumo-Chr3 13751459 13753071 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00883 31 344 Peroxidase AT5G51890 70.476 1.28e-167 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00883 K00430 - gmx:100799516 654.825