Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00880 ATGGGCAAGGAGTGGCATTGGGGTGGAAGGTCCTCCAAGAGAGGTGGAGGTGCTGAAACAGAAATCCCTTCTGGTTGCATGTGTGCAATGTTTCAGGCCTTTGATTTTCATCCATTTCACTTTTCCATTAACCAGCAACAATCCTCTTTCAAATCTCGCACCCCAGAAGACCACACTGTCCCCAAAGGGGCTGAAGCACCAAGGAGTAGCTTGGAGTCAGAAGATGGTACGACAGTGTCATCAATCTCAAAAGAAGAAAATTTTAAAATACCTAAGAACATTCGAATCAAAACAAGAGGGAGGACAAGATCAAGAACAGAAAGTTTCAGTGATCTTTCCTCAGAGATCAGTGCCTCTCCAGGGACCAAGACACCTACTTTGGTTGCAAGATTAATGGGTCTTGATCTTCTTCCTGATGCACATTCCTCTTCTTCCCCATGCCTTTCCACTCCAAACCGTCATAGACCACGGCAACACATCAAAATAATCAAACATAGAAACAGCACAGGCACTAACACCTTGCCTGAGACTCCTAGAATGTCCTCTGCAAGAAGATCAGATGTTGAGCATAGACTCTCTCTCCAAATCAACAAGGAGAACACAGTCCCCTATGAGGATTTTGAGGTTCCTCGGTTTTCATTTTCAAAGAGGAAATATGATGAGAACAGTAGCAGGAGTCCAGGCCACTATGCCAGGCAAATTGTCAAACAAGTTAAAGAGAGTGTGAGCAGGAAGGTTGGACTTGACATCACCAACACTGTCAAGAACAGAGAACAAGGAAGAGAAGAATCTGTAGGCCAATTGAAATTCAAGAAAACTCCTAAAACTTCAGTGAATGAATCCAGCCCTGGAAAACACTCAAACCCATCTTACTCCCCAAGGCTCAGCAGATTCATTGATTCCAAACACAAACCAAGCACAACAACATCATCATCACCAATTACTCCAAAAAACCAAAGCACACACTCAGTTCCAAAACCACCATCACCTCCTCCTGTTGTCAACATTGAAACACAGCTTTCAAGAGTTTCGACAAAGCCAAAGCCTCAAGCATTGCCCGAGAAAGAGTTGCAGAACCAAAAATCAGTCACAAAATGCAACAAGAACAGTAGCCGTGGAAAGTTGAGTTTCCGGGTCAACAAGCCTCCACAGACATCAATCAGAAACAAGCAAGAGTCATTTATTACGCGTCCCCCATCAGCCACTAAAGCCAATGACATCAAAACCAAAAACAAGAGAACTCATCCACTTTCAAGCAATCTTCTTAATAACCTCAACACGGTCCCAAATCTTCTCCCTGTCAAGACAGGACCTTCTCCTCCAAAACAGTCACAGGTATGTGATGATGATACTCGAGATGCAAAACGCAGCGCACAGTTATTTAGTTGTTCGCGCCCAACGTACAAACAAGAAGCGCCACGACCACACCCACCCCGAGGAGGAACCACCAGCGATGTCGACAAATCTCACGGCGCCCTCGCCACCAACACCGGCGCAGACGACGACGACGAAGGACCAGAATATCAGTACATCACAGCCATCCTAACCCGTACCACCCCTGGGCCCCACCACCTCCAGTTTCAGCAGTGGTTCTCTCCGACACACCCACTGGACCCTTCAGTTTTTCACCGTCTCGAGCGCTACCCAACATGCGATTCCTTTGTTTCCTTCGCCGACGACAACAAAGATTGCATCTTTCAGCGGAAACACCATCTGGGTCCGCGCTGCAACCGTAGATTACTGTTCGATTTGGTTGACGAGTTGCTGTCGGAGATTCTTGTTCAGCCGAGCAGGCGTTACAAAGGGTCGACGTTGTTGGAGACGGTGTGGGAGAGGTTTCGGAGTTTCCCACGTGCGAAGTGCGAGGTTTTGGAGGATATTGACGGGTTGATAGAGATGGAGAAGATGAAGGAAGATGAGGAAGGGGAAGGGTTGGTGAAGGAGATTGAAAGGAGCGTGTTTGAGACGTTGGTGCATGAAACGTTTACCGTTATGATGGTTGGTGTTGGTGGCGTGGATACGTAG 2025 0.4706 MGKEWHWGGRSSKRGGGAETEIPSGCMCAMFQAFDFHPFHFSINQQQSSFKSRTPEDHTVPKGAEAPRSSLESEDGTTVSSISKEENFKIPKNIRIKTRGRTRSRTESFSDLSSEISASPGTKTPTLVARLMGLDLLPDAHSSSSPCLSTPNRHRPRQHIKIIKHRNSTGTNTLPETPRMSSARRSDVEHRLSLQINKENTVPYEDFEVPRFSFSKRKYDENSSRSPGHYARQIVKQVKESVSRKVGLDITNTVKNREQGREESVGQLKFKKTPKTSVNESSPGKHSNPSYSPRLSRFIDSKHKPSTTTSSSPITPKNQSTHSVPKPPSPPPVVNIETQLSRVSTKPKPQALPEKELQNQKSVTKCNKNSSRGKLSFRVNKPPQTSIRNKQESFITRPPSATKANDIKTKNKRTHPLSSNLLNNLNTVPNLLPVKTGPSPPKQSQVCDDDTRDAKRSAQLFSCSRPTYKQEAPRPHPPRGGTTSDVDKSHGALATNTGADDDDEGPEYQYITAILTRTTPGPHHLQFQQWFSPTHPLDPSVFHRLERYPTCDSFVSFADDNKDCIFQRKHHLGPRCNRRLLFDLVDELLSEILVQPSRRYKGSTLLETVWERFRSFPRAKCEVLEDIDGLIEMEKMKEDEEGEGLVKEIERSVFETLVHETFTVMMVGVGGVDT 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00880 674 MobiDBLite consensus disorder prediction 97 123 - -
Pumo3g00880 674 Pfam Domain of unknown function (DUF4378) 507 660 IPR025486 -
Pumo3g00880 674 MobiDBLite consensus disorder prediction 270 295 - -
Pumo3g00880 674 MobiDBLite consensus disorder prediction 253 505 - -
Pumo3g00880 674 MobiDBLite consensus disorder prediction 109 123 - -
Pumo3g00880 674 MobiDBLite consensus disorder prediction 47 83 - -
Pumo3g00880 674 MobiDBLite consensus disorder prediction 414 445 - -
Pumo3g00880 674 PANTHER LOW PROTEIN: M-PHASE INDUCER PHOSPHATASE-LIKE PROTEIN 1 667 - -
Pumo3g00880 674 MobiDBLite consensus disorder prediction 302 322 - -
Pumo3g00880 674 Pfam DUF761-associated sequence motif 113 143 IPR032795 -
Pumo3g00880 674 MobiDBLite consensus disorder prediction 255 269 - -
Pumo3g00880 674 MobiDBLite consensus disorder prediction 355 405 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00880 Pumo-Chr3 13715520 13718559 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00880 94 663 TRM (TON1 Recruiting Motif) Superfamily AT5G62170 34.444 1.56e-56 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00880 - - gmx:102659931 1082.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00880 3 13715520 13718559 Pumo3g00880 3 13715520 13718559 ECH
Pumo6g02676 6 64012483 64016884 Pumo3g00880 3 13715520 13718559 PCT