Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00873 ATGTCACTACACTCAGTGGTTACTGTATTCTCCATATATCTCATCTATGCATCCATAGTTGCTAATTCAGCTATGGATCCCTACAAGGCTCTCAACATCATCCTCAACCCAAACGGAACCCTCACACGCTTAAGCATTCCCCCACAAAGCCCTCCCTCACCGGATCCCACCCTCCCCACACCGGTTCTCTCCAAAGACCTCCCCATCAACCAATCCAAGCAGACCTGGGCGCGGATCTACCTACCCCACAAAGCACTGGATTATCCCCCCAACTCCAAACTACCCCTCATTGTGTTCTACCACGGTGGGGGCTTTATCTTCTACAGCGCCAACTCCACTTACTTCCACGACTTCTGCGTCAGAATGGCCAACAGCACTCAATCCGTCGTCGTTTCAGTCGAGTACCGCCTCGCCCCTGAGCACCGCCTCCCCGCGGCCTACGAAGACTCCGTGGAGGCGCTGCACTGGATCAAAGCCTCCAACGACCCCTGGTTGCGCCACGCGGATTACTCCCGCTCTTATCTCATGGGAGAGAGTGCCGGGGGGAATATTGCCTACACCGCAGGTCTACGTGCAGCCGCGGAGGTTGATCAGATCAAGCCACTCAAAATAAAAGGGTTGATACTAATTCAACCGTTTTTTGGTGGGACCAAGAGGACTCCTTCAGAGATAAGGCTTGCCGAGGATAACACTATCCCTTTGCCTATCACTGATCTGATGTGGAATCTTTCGTTGCCCGTTGGCGTTGACCGTGATCACGAGTATTCCAATCCAACGATCAAGGGTGGTGCTAAGATCTTGGATCGGATTAAGGCTCTTGGGTGGAGGGTTGCGGTGTTTGGGGTTGAAGGGGACCCACTGGTGGACCGTGAGAGAGAGTTGGTGGAACTGCTCCAGAACAAGGGTGTGCACGTGGTTGGACAATTTTATCAAGGAGGTCGACATGGCATTTTCGTGGGTGACCCTTCTATGTCTGCCAAAGTCTTTCATCTACTTAAAAGTCTTCATTGA 1011 0.5242 MSLHSVVTVFSIYLIYASIVANSAMDPYKALNIILNPNGTLTRLSIPPQSPPSPDPTLPTPVLSKDLPINQSKQTWARIYLPHKALDYPPNSKLPLIVFYHGGGFIFYSANSTYFHDFCVRMANSTQSVVVSVEYRLAPEHRLPAAYEDSVEALHWIKASNDPWLRHADYSRSYLMGESAGGNIAYTAGLRAAAEVDQIKPLKIKGLILIQPFFGGTKRTPSEIRLAEDNTIPLPITDLMWNLSLPVGVDRDHEYSNPTIKGGAKILDRIKALGWRVAVFGVEGDPLVDRERELVELLQNKGVHVVGQFYQGGRHGIFVGDPSMSAKVFHLLKSLH 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00873 336 PANTHER ARYLACETAMIDE DEACETYLASE 34 310 - -
Pumo3g00873 336 Pfam alpha/beta hydrolase fold 97 318 IPR013094 GO:0016787
Pumo3g00873 336 Gene3D alpha/beta hydrolase 28 335 IPR029058 -
Pumo3g00873 336 SUPERFAMILY alpha/beta-Hydrolases 36 322 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00873 Pumo-Chr3 13614002 13615215 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00873 49 296 Carbohydrate Esterase AT1G68620 41.732 7.62e-55 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00873 - - gmx:100777262 580.482
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02685 6 64193344 64195286 Pumo3g00873 3 13614002 13615215 PCT
Pumo3g00873 3 13614002 13615215 Pumo6g02687 6 64222440 64223995 PCT