Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00865 ATGGACTCGGCCTCCCTGCAGGGCGAGCGCGAGTTCCAAAACGAGCTCTTCTTCGCGTCCAGACTCCGCTCCCCCCTGGTGGTCCCCGCCATCGGATTCTCCTCCGACCCCAAACGACGCCGTTTCCTCCTCGTGTACCACCTCATGCACAACGGCAACCTCCACGACGCCCTCTTGCGCCGCAAAATCCCCCACTTCACGCGCTGGAAAAACCGCTTCTCCATAATCCTCGATGTTGCAAAGAGCATCCACTACCTCCACTCCCTCGAACCCCCCATCATCCACGGCGACATAAAACCTAGTAATATTCTTCTAGATAGTTCCTTCTCCGCCAAACTCGCCGACTTTGGCCTTGCGCGCTTAAAATCGGAGGTAGAAGAATTTAAAGCAAAACGCGACGAGAAGTCAGAGAGTGACGCCGGGTCAGAATTAGAAACTCAGAGCGTCAACACTGAACAATCATTTGACGATACTGGTAAACAGAGCACTGCCTCGGATTATGTGATGGATTGGATTGGGAAGGAGGTGAAGAAGGAAAGGCCCAACGAGATGAAGAACAATGGTTCTGCTGCATCGAGTAGTGGAACGGTGGAAAAGAAGAAAAGTAGGAAGAAATTGGAATGGTGGGAATCCATGGATGATAGTGGAGTTTTGAAGAAGGAAAAGAGAAGGCCAGCTAGGGAATGGTGGAAGGAGGAGTATTCTGAAGAGCTTGCAAGGAAGAAGAAGAAAAAGAATAAGAAGGAGAAGAAAAAGAGAAATGGTGAGATAGATGATGTGTACGGCGATGTAAATGTTTACAAGAGGGAGAAGAACCGGAGTAGGAACAGTGGTGGCAGTGTAGATTCGTGGTTCAGCGGGGAGCTACGTGGAGTTCGATGGAACAGCTATGACTCAGGGACTGGTAGCGGAGAGATAGTACCAAAGAGTGGTGGTGTGAGTAGTACTCCCAGTATGAGGGGAACGGTTTTCTACGTTGCTCCAGAGTATGGCTACAATGGGGATGTCTCAGACAAGTGTGACGTGTACAGCTTCGGGGTATTGTTGCTTGTAATTGTTTCTGGGAGGAGGCCACTTCAGGTGACTGGGTCGCCGATATCGGAGTTTCAGCGCGCGAATCTGGTGTCTTGGGCGAGGCAATGTGCGCGGAGAGGGAAGCTTCTGGAAGTGGTGGATGAGAGTGTTGAGGGGTTGGATAAAGAGCAGGCCAGTCTGTGCGTGACGGTTGCGCTTATGTGTTTGCTAAAGTCACCTGTCCGTCGTCCTTCCATGAAGGAGGTTCTGGGAATGCTCAGTGGGGAGATGGCGGCTCCGCCGTTGCCGGTTGAGTACTCGCAGCAACAGTTCAAGTCCAGGAAAGAAGGCCGGTGA 1371 0.5164 MDSASLQGEREFQNELFFASRLRSPLVVPAIGFSSDPKRRRFLLVYHLMHNGNLHDALLRRKIPHFTRWKNRFSIILDVAKSIHYLHSLEPPIIHGDIKPSNILLDSSFSAKLADFGLARLKSEVEEFKAKRDEKSESDAGSELETQSVNTEQSFDDTGKQSTASDYVMDWIGKEVKKERPNEMKNNGSAASSSGTVEKKKSRKKLEWWESMDDSGVLKKEKRRPAREWWKEEYSEELARKKKKKNKKEKKKRNGEIDDVYGDVNVYKREKNRSRNSGGSVDSWFSGELRGVRWNSYDSGTGSGEIVPKSGGVSSTPSMRGTVFYVAPEYGYNGDVSDKCDVYSFGVLLLVIVSGRRPLQVTGSPISEFQRANLVSWARQCARRGKLLEVVDESVEGLDKEQASLCVTVALMCLLKSPVRRPSMKEVLGMLSGEMAAPPLPVEYSQQQFKSRKEGR 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00865 456 MobiDBLite consensus disorder prediction 142 161 - -
Pumo3g00865 456 MobiDBLite consensus disorder prediction 130 161 - -
Pumo3g00865 456 PANTHER OS07G0586332 PROTEIN 157 453 IPR044576 -
Pumo3g00865 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 93 105 IPR008271 GO:0004672|GO:0006468
Pumo3g00865 456 Gene3D Transferase(Phosphotransferase) domain 1 299 438 - -
Pumo3g00865 456 MobiDBLite consensus disorder prediction 175 199 - -
Pumo3g00865 456 Coils Coil 231 254 - -
Pumo3g00865 456 ProSiteProfiles Protein kinase domain profile. 1 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00865 456 SMART serkin_6 1 440 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00865 456 Gene3D Transferase(Phosphotransferase) domain 1 1 166 - -
Pumo3g00865 456 SUPERFAMILY Protein kinase-like (PK-like) 10 444 IPR011009 -
Pumo3g00865 456 Coils Coil 118 138 - -
Pumo3g00865 456 Pfam Protein kinase domain 9 125 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00865 Pumo-Chr3 13543123 13545872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00865 309 428 Receptor kinase-like Gene Family AT3G58690 37.600 3.86e-14 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Pumo3g00865 Pkinase 6.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00865 - - gmx:100817816 755.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo6g02692 6 64387324 64390718 Pumo3g00865 3 13543123 13545872 PCT