Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00863 ATGGAAAAGATGGCTCTCATTCTAGCAAGCTATCTCCTCTTGAGTAGTACACTCTTATCTGCAAATGCTGAATTTGTCAAGAAGACTTACATCATTCAAATGGATAAGTCAGCAAAGCCTGACACCTTCTCCAATCACCTTGAATGGTATTCATCAAAAGTGAAATCAATTTTGTCCAAATCAGTAGAAGCTGAGATGGACAAGGAAGAGAGAATCATTTACACTTACCAAACTGCTTTTCATGGAGTAGCTGCCATGTTGAGCCAAGAAGAAGCTGAGAAGCTAGAGGCAGAAGAAGGTGTTGTGGCCATATTCCCTGATACAAAGTACCAACTACACACCACAAGAAGTCCAACTTTCCTTGGGCTTGAACCAACACAAAGCACCAACATGTGGTCAGAAAAGCTAGCCAACCATGATGTCATAGTGGGAGTGCTAGACACTGGGGTTTGGCCTGAGAGTGAGAGCTTCAATGACACAGGCATGAGACCGGTACCTTCTCACTGGAAAGGTGCCTGTGAGACTGGGAGAGGCTTCAGAAAGCATCACTGCAACAAGAAGGTTGTGGGGGCAAGAATGTTCTACCATGGATATGAAGCAGCAACAGGTAAAATTGATGAGCAAGCAGAATACAAATCACCAAGAGACCAAGATGGTCATGGCACTCACACTGCAGCTACAGTTGCTGGCTCTCCAGTGCATGGTGCTAATCTTCTAGGCTATGCTTATGGCACAGCAAGAGGAATGGCTCCAGGAGCAAGAATTGCTGCTTACAAAGTATGCTGGACTGGTGGATGCTTCAGCTCAGATATTCTATCAGCTGTTGATAGAGCTGTGGCTGATGGAGTTGATGTTCTATCCATCTCTTTGGGTGGTGGAGTCTCCTCTTACTACCGTGATAGTTTATCTGTAGCTGCATTTGGAGCAATGGAGAAAGGTGTTTTTGTTTCATGTTCTGCTGGAAATGCAGGACCTGACCCTGTGAGCCTCACAAATGTGTCACCTTGGATCACCACAGTTGGAGCCAGCACAATGGATAGAGATTTTCCTGCACATGTTAGGCTTGGAAATGGAAGAAAGATAACCGGAACCTCACTCTATAAAGGGAGAAGCATGCTCTCGGTTAAGAAACAATACCCTTTGGTATACGAGGGAAACAGTAACTCAAGCATCCCTGATCCAAGATCTTTGTGCTTGGAAGGTACTTTGGATCGTAAATTGGTTTCAGGTAAGAATTGTTATTTGTGA 1248 0.4455 MEKMALILASYLLLSSTLLSANAEFVKKTYIIQMDKSAKPDTFSNHLEWYSSKVKSILSKSVEAEMDKEERIIYTYQTAFHGVAAMLSQEEAEKLEAEEGVVAIFPDTKYQLHTTRSPTFLGLEPTQSTNMWSEKLANHDVIVGVLDTGVWPESESFNDTGMRPVPSHWKGACETGRGFRKHHCNKKVVGARMFYHGYEAATGKIDEQAEYKSPRDQDGHGTHTAATVAGSPVHGANLLGYAYGTARGMAPGARIAAYKVCWTGGCFSSDILSAVDRAVADGVDVLSISLGGGVSSYYRDSLSVAAFGAMEKGVFVSCSAGNAGPDPVSLTNVSPWITTVGASTMDRDFPAHVRLGNGRKITGTSLYKGRSMLSVKKQYPLVYEGNSNSSIPDPRSLCLEGTLDRKLVSGKNCYL 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00863 415 PRINTS Subtilisin serine protease family (S8) signature 216 229 IPR015500 -
Pumo3g00863 415 PRINTS Subtilisin serine protease family (S8) signature 138 157 IPR015500 -
Pumo3g00863 415 ProSiteProfiles Serine proteases, subtilase domain profile. 109 415 - -
Pumo3g00863 415 Gene3D Peptidase S8/S53 domain 140 345 IPR036852 GO:0004252|GO:0006508
Pumo3g00863 415 SUPERFAMILY Protease propeptides/inhibitors 28 111 - -
Pumo3g00863 415 Pfam Peptidase inhibitor I9 29 113 IPR010259 -
Pumo3g00863 415 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 412 IPR045051 -
Pumo3g00863 415 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 15 113 IPR037045 -
Pumo3g00863 415 FunFam Subtilisin-like protease SBT1.9 18 113 - -
Pumo3g00863 415 CDD Peptidases_S8_3 110 345 IPR034197 -
Pumo3g00863 415 SUPERFAMILY Subtilisin-like 112 372 IPR036852 GO:0004252|GO:0006508
Pumo3g00863 415 Pfam Subtilase family 140 385 IPR000209 GO:0006508|GO:0008236
Pumo3g00863 415 CDD PA_subtilisin_like 353 411 - -
Pumo3g00863 415 Gene3D - 346 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00863 Pumo-Chr3 13521774 13523021 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00863 11 411 Subtilisin-like Serine Gene Family AT5G51750 69.951 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00863 - - gmx:102661592 758.444