Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00848 ATGGAGGGAAATGATGAAGCTAGATGCAAAGATGATTGGGGTTCTTCTGTTGAAATGGATCTCTACGAAAGCAACTTTCAGGAAAATGATGAAACCCTTTCTGACGGCCCTCATAATACCTCATCAAGCATGTTAACAAGCTCCTCATCTAGCAGCAGATGTTTTGCATCCCGGAAGTCAGGCAAACGGTGGAAAAGGCGGTATTATTTACAGCAGAAAGCTCGTCAAGAACGCTTGAACAACAGTAGGAAGTGGAAAGCTATAGATCATGACCAGTTGTTGAGCAAGAAGATTCACAGAATTTCTGAACCAGGAAATTGTGATAGTCTTGCTTCTGAAAGTTGTGCAGAAATTGTATCAGAGAATGGGAGCCTGGATGATAATAATAAAAGAATATTATCTGAACGAGCAGTAAATGACAATGCAATAGATAATGATAACAATGATGAAGTAATTATTGAAAAGCACTTTTCTGGAGAAGATTGTTGCACTACTGAAAGCAAAGATGAAAAAGATGCATCCTTATGCTCCTTAGAGAAGAGGCAAAGTGAACAGGATGAAGCATCTTGTTTAGAACTTTTGGAGTGTGTTTCTAAATCAAAGAGACATTTAGATCGGGATCTTGATAATCCTAAACCATGCAAGTCTAGAAAATCAGTTAGTTCTAGTTCATTATTGTCTTGCAAATACAGCAAGATATCATTTTGTGGCATTGAAGACCATCTATCAGATGGCTTTTATGATGCAGGACGAGATCGGCCGTTTATGCCTCTTGAGAGTTATGAGCAAAATCAGTGTCTTGCTTTTCGTGAAGTCATCCTTTTGGACAGAAAAAAGGATGAAGAGTTGGATGCTGTTATGCTAGCTGCTCAGGCATTGGTTTATAATTTGAAGAAGTTAAATGGTTTAAACAGACATGGGAACCAGGATGGGGTTGATAACTTGCAGACGGCATCACTGCTTGCACTCTTTGTATCGGATCATTTTGGTGGCAGTGATAGAAGTGCTATTGTAGAAAGGACACGGAAATCTGTGTCTGGTTCAAACTATAATAAGCCTTTTGTCTGTACATGCTCAGCTGGAAGCAGCACCAGTATAAGTGCTTCCACTGAACCATTTGCAAACACCATAGAAGATATCACTCTTTCTAAGATGTCGGAAAAATCTCTTGACTCTATAAAAAAAAGGCGAAATTCAATCATCGTTCCAATTGGCTCTGTGCAGTATGGTGTATGTAGACATAGAGCTCTGCTTTTTAAGTATTTATGTGATCACATGGAGCCACCAGTTCCGTGTGAGCTTGTCAGGGAGGGGTGCTACATGGGTCGAATGCTGATTGATGCTTGTCGACCTCTTGATATAAGAGAAGAGAAAGATCCTGAATACTTTTGCAGGTACATACCTCTTAATCGAACCACAATCCCTCTATCATCTATAGGAAGTCTGGGTCCTGATTATTCTTTTCCATCTCTCACTACATGTGACGAACTTGAGACAAAGGCTTTGACTACTTTAGTTAAATGCAAATTCGGATCAGTTGAGGCTGCAGCAAAGGTGCGTACTTTGGAAGAGCAGGGGAGTTCGGCAGACAAAATTAAAAACTTCGAATATAATTGTTTGGGAGAAATTAGAATTCTTGGTGCTTTAAAACACCCCTGCATAGTGGAAATGTATGGGCACCAAATTTCATGTCAATGGTCTGTCTCAGCTGATGGTAATCCTCAACACCGTGTATTAAGATCTGCAATTTTTATGGAGTATGTGGAAGGGGGCTCCTTAAAAAACTATCTGAAGAAGCTGTCAGAAGCTGGTGAAAAGCATGTTCCTGTGGAGTTGGCTTTGCATATCGCGAAAGATGTCTCATGTGCTTTGTCAGAGCTGCACTCAAGGCACATAATTCATCGTGACGTAAAAAGTGAAAACATACTGTTTGATTTGGATAGGAAGAGAGATGATGGAACTCCCACTGTGAAGCTCAGTGATTTTGATAGTGCAGTGCCACTAAGATCAGCTTTACATGCGTGTTGTATTGCTCATGCGGGAACACCTCCTCCCTGTGTATGTGTTGGAACACCTCGGTGGATGGCTCCAGAGGTTATGCGGACTATGTATAAAAAAAACTCTTATGGATTGGAAGCTGACATTTGGTCGTTTGGATGTTTACTTTTGGAGATGCTGACTCTGCAAATTCCATATTCTGGACTTTCTGATCCACACTTCCTTGATAGTCTGCAGATGGGTAAACGACCACAATTAACTGATGAGCTGGAGGTATTGAGTTCAATGAATGAACCCACAATGATTTCATCGGGTGAAGAGCTGGAAAAATCAGATGCTGAGGTTGACATGTTGAAATTCCTTGTTGATTTGTTTCATAAGTGCGTGGAAGAAAATCCAAGCAAACGTCCTACAGCCGAAGAAGTCCATAAAATGCTGCTTGCACACACAGGTCGCTTACAAGTTTAA 2466 0.4067 MEGNDEARCKDDWGSSVEMDLYESNFQENDETLSDGPHNTSSSMLTSSSSSSRCFASRKSGKRWKRRYYLQQKARQERLNNSRKWKAIDHDQLLSKKIHRISEPGNCDSLASESCAEIVSENGSLDDNNKRILSERAVNDNAIDNDNNDEVIIEKHFSGEDCCTTESKDEKDASLCSLEKRQSEQDEASCLELLECVSKSKRHLDRDLDNPKPCKSRKSVSSSSLLSCKYSKISFCGIEDHLSDGFYDAGRDRPFMPLESYEQNQCLAFREVILLDRKKDEELDAVMLAAQALVYNLKKLNGLNRHGNQDGVDNLQTASLLALFVSDHFGGSDRSAIVERTRKSVSGSNYNKPFVCTCSAGSSTSISASTEPFANTIEDITLSKMSEKSLDSIKKRRNSIIVPIGSVQYGVCRHRALLFKYLCDHMEPPVPCELVREGCYMGRMLIDACRPLDIREEKDPEYFCRYIPLNRTTIPLSSIGSLGPDYSFPSLTTCDELETKALTTLVKCKFGSVEAAAKVRTLEEQGSSADKIKNFEYNCLGEIRILGALKHPCIVEMYGHQISCQWSVSADGNPQHRVLRSAIFMEYVEGGSLKNYLKKLSEAGEKHVPVELALHIAKDVSCALSELHSRHIIHRDVKSENILFDLDRKRDDGTPTVKLSDFDSAVPLRSALHACCIAHAGTPPPCVCVGTPRWMAPEVMRTMYKKNSYGLEADIWSFGCLLLEMLTLQIPYSGLSDPHFLDSLQMGKRPQLTDELEVLSSMNEPTMISSGEELEKSDAEVDMLKFLVDLFHKCVEENPSKRPTAEEVHKMLLAHTGRLQV 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00848 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 632 644 IPR008271 GO:0004672|GO:0006468
Pumo3g00848 821 ProSiteProfiles Protein kinase domain profile. 499 812 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00848 821 Pfam Protein kinase domain 530 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00848 821 SUPERFAMILY Protein kinase-like (PK-like) 506 812 IPR011009 -
Pumo3g00848 821 PANTHER SERINE/THREONINE-PROTEIN KINASE SBK1 11 816 - -
Pumo3g00848 821 Pfam Ethylene-responsive protein kinase Le-CTR1 381 441 - -
Pumo3g00848 821 MobiDBLite consensus disorder prediction 24 57 - -
Pumo3g00848 821 FunFam Leucine-rich repeat protein kinase family protein 537 818 - -
Pumo3g00848 821 Gene3D Transferase(Phosphotransferase) domain 1 491 818 - -
Pumo3g00848 821 SMART serkin_6 491 814 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00848 821 MobiDBLite consensus disorder prediction 24 60 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00848 Pumo-Chr3 13258008 13266473 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00848 501 814 MAP Kinase Kinase Kinase AT2G24360 27.302 1.89e-23 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-2 Pumo3g00848 Pkinase 9.4e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00848 - - gmx:100819959 1464.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00848 3 13258008 13266473 Pumo3g00848 3 13258008 13266473 ECH