Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00843 ATGGAGGAAGAAGAGAGTGAGTGTTTCGAGTGCCTCCAACTTCGAATAAAGTCGGATTTCTCTGAGCAAGTCTTATTCAATTATGCAATCTCCACTTCTGCTTTTCCTTTCGGATCCTCAGCCATCGTCAATATTTCTGGTACAGCTGATGGTGAAGCTTCGGGCGGTCAATTTATATTGCAGTACATGCCGAGTCGTGATAAGAATTGTTTTATCAATTATGTAAAAGAATATATTTTGGATAGTGGTGAAATCACTACTAAGAGTAGTGATCCTGATATTGGAAGCAGTGAAGAAAATAATGCTGTTAATGGTAGAATTGCTTCATCAGATTATTCTGACAGTGGAAAAGCTTTTTCTGGAAACACAAGTTGTAGTCATTCTGGAAGATTTTCTTGCTTGAGAACAATCACTTCACTCGCGCCGATTGCTCGTGTGGGAATGTCTTCCTATTCTACATTTCAAGAGGTTTTTACTGATTTCTTGTCTGGGTTAATCGAAGATCACGTGTTAGATTCACTTGATCTCTTCATTGAAGGGAAAGCATCTGGACAGGACAGTGTAAATTTCCTTAGTTTAATTGGGTTGCCATCATTTGAAGAGGATCCTTTTCCAGGCTCTTTGAGGCATCCAAACATAGCTCCTGTCCTTGCAATTTTTAAAACATCTGATCACGTTAATGTAGTGCTTCCAAAGACTCCATACAACTTGGAAAGTATTCTTCATTTTAACCCTAATGCATTAAAGTCTGATTGGAATAGAAGATTTCTTATGTATCAGCTACTCTCAGCCTTATCGTACATACATGGTTTAGGGGTTTCTCATGGTAATATATGCCCATCCAATATCATGTTGACTGACTCATTATGGTCTTGGCTGAGATTATGGAATGAACCCGTATTGGAATCTAATGTAACTTTGCAGGAGAGTGAAAGAGTTAATTCCGAACCTGCAAGAATTGGTTGTTGTAATGTTGGTTGTCGTTCTTATCACCTTTATGCTGATCTAAAGCTTTCTCCAACAATAGATTGGCAATCTTGCTTTCATAAGTGGTGGAGAGGAGAATTAAGTAATTTTGAATATTTACTCATCTTAAACAGATTAGCAGGAAGAAGGTGGGGGGACCATACATTTCATCCAGTAATGCCTTGGGTAATCGATTTTAGCTCAAAACCTGATGATAATTGTGATGCTGGGTGGCGAGACTTGAGCAAGAGCAAATGGCGCTTGGCAAAAGGTGATGAACAATTGGATTTCACCTATTCAACATCTGAAATCCCTCATCATGTTTCAGATGAATGTCTGTCTGAATTGGCTGTCTGCAGTTATAAAGCAAGAAGACTCCCTTTGAGTGTTCTCCGAATGGCTGTTCGTTCAGTGTATGAACCTAATGAATATCCTTCCACAATGCAGAGGCTCTATCAATGGACCCCTGATGAATGCATTCCAGAGTTTTACTGCGATTCCCAAATTTTTAAGTCAATACATGATGGAATGGCGGATTTGGCTGTACCCTCTTGGGCAGAGAGCCCTGAGGATTTCATTAAATTGCATCATGATGCATTAGAAAGTAATAGGGTGTCATTTCAACTCCATCACTGGATAGATATAACCTTTGGTTACAAAATGTCTGGCCAGGCAGCTATTGCTGCTAAGAATGTTATGCTTCCTCTATCAGAACCCATGATGCCAAGATCAACAGGACGTCGTCAGCTCTTTACACAACCACACCCCATCCGTCATGCCACTACCCGAGCAAAACGTCTTGGTTCCAGTAAATATGCCAAAGTTTGGAGTCAAGCAAATGAAATTCACCGAGAGACATCTCTTCTATCTGAAACTGCTTATCTACAAGAACTAGAGCAAGCATCTACATTTTCTGAACATGCTCGGCATTTGAATGCCTGTTACCATTATCCCTTGAATCAAATGACAGGGAAGAACATCTCATCTTTGGGAGATCCAACAACAGCGACATTTAGTGAAAGTATAAGCAAACTACCTTTGATTGACAGAAATTACCAGGTGCCGTATAAAATGAATCTAATTTCTTTTCTTCAACATATGAAAGAGGAAGATGAAGGCTCCTCAGGATATCCAGACTTGCTACTTTGGAAGCAGAAATTATCTTCTTCAAGACTTTGCTCTAAAGATGTTGCTAGGGACATATTTTCTATTGGTTGTCTTTTGGCTGAACTCCATCTTTGCAGGTCGCTCTTTGATCCAATCTCATTGGCAATATACTTGGAAGATGGAACCTTACCAGGATTTCTGCAGGATCTACCTCCAGATATTAGATTTCTCATTGAAGCATGCATTCAAAAGGATTGGATGAGGAGGCCATCTGCCAAAATTCTTCTGGAATCACCTTATTTTCCAAAGACTGTCAAGTCCTCCTACTTGTTTCTTGCTCCACTTCAGCTTGTAGCTAAAGATGAAACTCGTCTTCGTTATGCTGCAAATCTTGCAAAGCACGGAGCTCTCAGGGAAATGGGCACATTTGCAACGGAAATGTGCACTACTTATTGCTTACCACTTATAGTGAATGCTGTGAGTGATATTGAAGCTGAATGGGCATATATGCTACTGAAGGAATTCATGAAATGCTTAACAGTGCAAGCAGTGAAAACATTAATCTTGCCAACCATACAGAAAATTTTACAGACCACAGGTTATTTACGTTTAAAGGTTGCCCTTCTACAAGATTCATTTGTACGGGAAATATGGAATCGAGTTGGTAAACAAGCATACCTGGAAACTATTCATCCATTGGTCTTGTCAAACTTGTACATTTCTCCAGATAAAAGTTCAGCTGCCTCTGCTTCAGTGCTTCTAATCAGTTCTAGTGAAGAGCTTGGCGTACCTATTACCATCCATCAGACTATCTTGCCTCTTGTTCACTGCTTTGGGAAAGGACTATGTGCAGATGGCATTGATGTGCTGGTTAGAATTGGTGGCATTTTTGGGGAATTGTTTATCGTCAAACAGATGGTACCTTTACTGAAAAATGTTGCTCGTTCCTTCATTGATGTGTCATGCATGAATAAGCCTGATCCTGTCCAGAGTTGGAGTGCTTTAGCACTTATTGATTGCATGATGACTTTAGATGGCCTTGTAGCTTTCTTGACAGAAGAGGTCATTATAAAGGAGCTGCTTGAAGACCTAAGTTGCATACACATTGGGGTTCTTATGCAGAAACATATGGAAATTGCAGTGCTTCAGGTTGCTGCTTCTACTCTCTTTGGAATTTGTCAGCGGATTGGAGCAGATTTGACAGCATTGCATATTCTTCCAAAACTTAAAGAACTATTTGATGAGCTTGCTTTCTCCCAGGAAATTTCTAAAGGTTCAACTACTGTTGGCAGAAACTTGAAGGTTGGCAAAATAAAAATTGGAGGGGACTTGCATATTGAAAGTCGTATGGATCTAGTGTTGGTTCTCTATCCTTCCTTTGCATCTCTTCTTGGGATAGAGAAACTTCGTCAATGTTGTGCTACATGGTTGATTCTTGAACAATATCTTCTACGCCATCATAATTGGAAGTGGGAATATGCAGGAGAATCATCAAAAAACGGCTCAGAAATTATTCTTGCTAGGAGACCTATAATAGCCCAGGGATTTACATCTGAATACAATCCTGCAAAGCTGTTGCTTAATGGGGTTGGATGGTCAATTCCACAATCCCAAGGAAGTAGAAGTGCCAAAAATTTGATCCCTCAGAGACGACCATTTAAAGTTCATCAAAGTCCAGTAGCAGTGCACGAAGGAATGTCATACCAAATGAACCATGAACCCTGGTTTTGGTTCCCTAGTCCAGCCACCATCTGGGATGGGCCTGAATTTCTTGGGAGGGTGGGGGTTCAGAAAGATGATCTTCCATGGAAGATCAGAGCATCTGTTATATACTCTATACGTGCACATCATGGAGCAGTGAGGTCTCTTGCTGTTAACCATGATGAATGTACTGTTTTTACTGCAGGAATTGGCCAAGGATATAAAGGAACTGTTCAGAAATGGGAATTGAGCCGAACTAACTGTCTGTCTGGCTATCATGGCCATGAGGAGGTTGTGAATGATATTTGCATCTTATCATCTAGTGGAAGAGTGGCATCTTGTGACGGAACAATTCACATTTGGAATAGTCAAACAGGGAAGCAAATATTAGTATTTGCCGAGTCCCAAACAGAATCTGGCCATCCAACAAGCCATCCATCCTCTGCATCAAAAATTAACAGCGACCAGGCAAATGTGCTTAATTTGAATACACTATCCAATGGAATATTGTCTAGCGCTTTTGATTCAAGCCTTTATACTTGTATGCATCTGTTAAACTCCGCTGAAACTCTTGTAGTTGGAACTGGAAATGGTTCTCTGAGGTTCATTGATGTTGCTCGAGGTCAAAAGCTTCATATCTGGAGAGGCCAATCTACTGAATCTAGTTTTCCTTCACTTATTTCTGCCATTTGTTCCACTGGCTCTAACAAGATGCAAGCAGATGAAATTTCCACTTTGCCATCTCTTATTGCAGCTGGACTAAGTTCTGGTCATTGTAAATTATTCGATGCAAAGAGTGGAAATGTCATTTCCTCTTGGCGAGCTCATGATGGATATGTGACAAAGTTGGCAGCACCTGAGGAACATCTGCTCGTTTCTAGCTCTCTGGACAGAACTTTACGAGTCTGGGACCTAAGAATGAATTTGCCATTGCAGCCCATTGTTTTCAGAGGTCATTCAGATGGTATATCCAGTTTCTCCATTTGGGGCCAAGATGTTATTTCAATTTCCCGGAATAGGATTGGGCTCCTCTCCTTGTCTAAATCTGTCAATGAAATAGATGGGCAGCATCACATAATCCCCCAGAGACTCTATGTTTCTGATAATGGTCAGAGAAGCTTGTCAGCGTTAACAAGTATTACTATACTTCCATTCTCTCGATTGTTTCTCATTGGAACCGAAGATGGTTATCTGAGAATCTGTTGTTAA 4983 0.4048 MEEEESECFECLQLRIKSDFSEQVLFNYAISTSAFPFGSSAIVNISGTADGEASGGQFILQYMPSRDKNCFINYVKEYILDSGEITTKSSDPDIGSSEENNAVNGRIASSDYSDSGKAFSGNTSCSHSGRFSCLRTITSLAPIARVGMSSYSTFQEVFTDFLSGLIEDHVLDSLDLFIEGKASGQDSVNFLSLIGLPSFEEDPFPGSLRHPNIAPVLAIFKTSDHVNVVLPKTPYNLESILHFNPNALKSDWNRRFLMYQLLSALSYIHGLGVSHGNICPSNIMLTDSLWSWLRLWNEPVLESNVTLQESERVNSEPARIGCCNVGCRSYHLYADLKLSPTIDWQSCFHKWWRGELSNFEYLLILNRLAGRRWGDHTFHPVMPWVIDFSSKPDDNCDAGWRDLSKSKWRLAKGDEQLDFTYSTSEIPHHVSDECLSELAVCSYKARRLPLSVLRMAVRSVYEPNEYPSTMQRLYQWTPDECIPEFYCDSQIFKSIHDGMADLAVPSWAESPEDFIKLHHDALESNRVSFQLHHWIDITFGYKMSGQAAIAAKNVMLPLSEPMMPRSTGRRQLFTQPHPIRHATTRAKRLGSSKYAKVWSQANEIHRETSLLSETAYLQELEQASTFSEHARHLNACYHYPLNQMTGKNISSLGDPTTATFSESISKLPLIDRNYQVPYKMNLISFLQHMKEEDEGSSGYPDLLLWKQKLSSSRLCSKDVARDIFSIGCLLAELHLCRSLFDPISLAIYLEDGTLPGFLQDLPPDIRFLIEACIQKDWMRRPSAKILLESPYFPKTVKSSYLFLAPLQLVAKDETRLRYAANLAKHGALREMGTFATEMCTTYCLPLIVNAVSDIEAEWAYMLLKEFMKCLTVQAVKTLILPTIQKILQTTGYLRLKVALLQDSFVREIWNRVGKQAYLETIHPLVLSNLYISPDKSSAASASVLLISSSEELGVPITIHQTILPLVHCFGKGLCADGIDVLVRIGGIFGELFIVKQMVPLLKNVARSFIDVSCMNKPDPVQSWSALALIDCMMTLDGLVAFLTEEVIIKELLEDLSCIHIGVLMQKHMEIAVLQVAASTLFGICQRIGADLTALHILPKLKELFDELAFSQEISKGSTTVGRNLKVGKIKIGGDLHIESRMDLVLVLYPSFASLLGIEKLRQCCATWLILEQYLLRHHNWKWEYAGESSKNGSEIILARRPIIAQGFTSEYNPAKLLLNGVGWSIPQSQGSRSAKNLIPQRRPFKVHQSPVAVHEGMSYQMNHEPWFWFPSPATIWDGPEFLGRVGVQKDDLPWKIRASVIYSIRAHHGAVRSLAVNHDECTVFTAGIGQGYKGTVQKWELSRTNCLSGYHGHEEVVNDICILSSSGRVASCDGTIHIWNSQTGKQILVFAESQTESGHPTSHPSSASKINSDQANVLNLNTLSNGILSSAFDSSLYTCMHLLNSAETLVVGTGNGSLRFIDVARGQKLHIWRGQSTESSFPSLISAICSTGSNKMQADEISTLPSLIAAGLSSGHCKLFDAKSGNVISSWRAHDGYVTKLAAPEEHLLVSSSLDRTLRVWDLRMNLPLQPIVFRGHSDGISSFSIWGQDVISISRNRIGLLSLSKSVNEIDGQHHIIPQRLYVSDNGQRSLSALTSITILPFSRLFLIGTEDGYLRICC 1660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00843 1660 SUPERFAMILY Protein kinase-like (PK-like) 718 803 IPR011009 -
Pumo3g00843 1660 SUPERFAMILY Protein kinase-like (PK-like) 207 290 IPR011009 -
Pumo3g00843 1660 SUPERFAMILY WD40 repeat-like 1300 1658 IPR036322 GO:0005515
Pumo3g00843 1660 ProSitePatterns Trp-Asp (WD) repeats signature. 1549 1563 IPR019775 -
Pumo3g00843 1660 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 1531 1564 - -
Pumo3g00843 1660 Gene3D Transferase(Phosphotransferase) domain 1 205 303 - -
Pumo3g00843 1660 SMART WD40_4 1425 1462 IPR001680 GO:0005515
Pumo3g00843 1660 SMART WD40_4 1343 1380 IPR001680 GO:0005515
Pumo3g00843 1660 SMART WD40_4 1297 1340 IPR001680 GO:0005515
Pumo3g00843 1660 SMART WD40_4 1625 1660 IPR001680 GO:0005515
Pumo3g00843 1660 SMART WD40_4 1524 1562 IPR001680 GO:0005515
Pumo3g00843 1660 Gene3D - 1494 1660 IPR015943 GO:0005515
Pumo3g00843 1660 SMART Beach_2 348 580 IPR000409 -
Pumo3g00843 1660 PANTHER GH12955P 1 1660 - -
Pumo3g00843 1660 Pfam WD domain, G-beta repeat 1345 1380 IPR001680 GO:0005515
Pumo3g00843 1660 Pfam WD domain, G-beta repeat 1526 1562 IPR001680 GO:0005515
Pumo3g00843 1660 Pfam Beige/BEACH domain 350 561 IPR000409 -
Pumo3g00843 1660 Gene3D - 1275 1493 IPR015943 GO:0005515
Pumo3g00843 1660 ProSiteProfiles Trp-Asp (WD) repeats profile. 1531 1564 IPR001680 GO:0005515
Pumo3g00843 1660 Gene3D Transferase(Phosphotransferase) domain 1 703 800 - -
Pumo3g00843 1660 Pfam Protein kinase domain 207 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00843 1660 SUPERFAMILY BEACH domain 329 580 IPR036372 -
Pumo3g00843 1660 CDD Beach 350 580 IPR000409 -
Pumo3g00843 1660 ProSiteProfiles BEACH domain profile. 336 606 IPR000409 -
Pumo3g00843 1660 Gene3D BEACH domain 340 580 IPR036372 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00843 Pumo-Chr3 13219657 13228946 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDKL-Cr Pumo3g00843 Beach 1.8e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00843 K17601 - gmx:100809116 3173.65