Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00831 ATGAACGGCGGCGCCACCACCGCCACCTTCCGATCCATCCTCGACAAGCCCCTCAACCAGCTCACAGAGGATGACATTTCTCAGCTCACTCGCGAAGACTGTCGCAGATTCCTCAAAGAAAAAGGGATGCGCAGGCCTTCCTGGAACAAATCGCAGGCGATCCAACAGGTCATTTCCCTCAAAGCGCTTCTGGAACCTTCCGACGATGATACCCCTCCTCCTCCTCCCGCCATGCACCACCACCACCACCACCACCATGCTCCTCCTTCTCAACCTCAAGTGAATTTGAGTGAACCTCCGCCCAAGGCCACGCCTCCTGAAGAACCCGCTTTTCATGCCGCTGAGGACATTCAGAAATCTGCCTCATCTGGGGAAAAGCCTACGGAAACTAATGACACCAACACCAACACCAACGTTGCTAGCCCCAAAGGGTGTGCAACTAGTGGATCATTTGGGCAAATGACAATTTTCTATTGTGGTAAGGTGAATGTCTATGATGGAGTCTCACCTGATAAGGCACGAGCAATCATGCATCTTGCGGCGAGTCCTGTCCAGTTTACTCAGGATGATCCTTTAAATGGAAATGCAGCTGTTTGGACTTCTCCATGCCACTTACCGATGGATAAGGATGTCCTAGTTCCTGTCGATACAACAATCCTTCAGGTTGCTCAAGCAGATAAGATGGTGGAATATCCTCTGCATTACAGAGAGAAAGGGAGCATTGCTCGCGATGCTGATGTAGAGGGTCAGGCAAGCAGAAAAGTGTCATTGCAGCGATATCTTGAAAAGCGTAAGGACAGGGGAAGATTGAAAGGCAAGAAATTGACTGGGATAACTTCATCTAACTTCGAGATGTATTTGAACCTTCCAGCGAAGGTCCATGCCTCAAATGGGAATTCAAGCCGTAGTAGTACTAGCTCTCCACCACAGCCTAGACTGCCTCTAGTTTCCAGTGGTTCAGCTGACAACCAGCTAAAGGTTGCCCTTCCCATTGATCTCAATGACAAAGATGTTCAAGAATGCTAA 1026 0.4942 MNGGATTATFRSILDKPLNQLTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQVISLKALLEPSDDDTPPPPPAMHHHHHHHHAPPSQPQVNLSEPPPKATPPEEPAFHAAEDIQKSASSGEKPTETNDTNTNTNVASPKGCATSGSFGQMTIFYCGKVNVYDGVSPDKARAIMHLAASPVQFTQDDPLNGNAAVWTSPCHLPMDKDVLVPVDTTILQVAQADKMVEYPLHYREKGSIARDADVEGQASRKVSLQRYLEKRKDRGRLKGKKLTGITSSNFEMYLNLPAKVHASNGNSSRSSTSSPPQPRLPLVSSGSADNQLKVALPIDLNDKDVQEC 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00831 341 MobiDBLite consensus disorder prediction 65 139 - -
Pumo3g00831 341 ProSiteProfiles Tify domain profile. 147 182 IPR010399 -
Pumo3g00831 341 Pfam tify domain 153 181 IPR010399 -
Pumo3g00831 341 Pfam Jas motif 250 267 IPR018467 -
Pumo3g00831 341 MobiDBLite consensus disorder prediction 121 139 - -
Pumo3g00831 341 MobiDBLite consensus disorder prediction 93 107 - -
Pumo3g00831 341 SMART tify_2 147 182 IPR010399 -
Pumo3g00831 341 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 11 284 IPR040390 -
Pumo3g00831 341 MobiDBLite consensus disorder prediction 294 321 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00831 1 296 Tify Gene Family AT4G14720 47.896 2.46e-73 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pumo3g00831 tify 5.4e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00831 - - gmx:100813937 542.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00831 3 13112109 13117888 Pumo3g00831 3 13112109 13117888 ECH