Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00824 ATGGCCTCTCATTCTCCCAATTATAGAGAAGGCCCTTATCTTATTGTACTATTCCTTGCCATTCTCATCTCCATCATCAACCCCTCACACCAAGACCCTTCTTCCCCTCTCCCCCCTCTAAACCCAAGGCTCACCAAAGCCTACACTGCTCTCCAAGCATGGAAGCACAAAATAACCTCAGACCCCAAGAACTTCACCTTAAACTGGTGTGGCCCCCATGTTTGCAACTACACTGGCATATACTGTGCTCCTGCCCCAGATGACCCTCACATCTACACTGTTGCTGGAGTTGACCTAAACCATGCCACCATATCTGGCTCATTGCCTGAAGAACTTGGCCTCTTATCTGACCTATCCCTTTTCCACATCAACTCCAACCGCTTCTGTGGTTCTCTCCCAAAAACCTTCGACCAACTCCACCTCCTCCATGAACTTGACATCAGCAACAACCAATTCTCGGGGCCATTCCCCGAGGTTGTTCTATGCATCCCTTCGTTAAAATTCTTGGACATCAGATTCAACAAGTTCTATGGCAACGTTCCCCCGCGCCTCTTCGACCTTAAACTCGATGCCCTCTTCATCAACAACAACAACTTCCAATTCTCGTTACCCGAGAATTTCGGCAACAGTCCTGCTTCTGTTGTTGTTTTTGCAAACAATGACCTCAAAGGGTGTCTTCCTTCGAGTTTGGCCAAAATGAAGGGTACCCTTAACGAGATTATCATCACCAACAGTGGCTTGACGGGGTGTTTGCCCAGTGAGATTGGGGATTTGGACAAAGTGACTGTGTTTGATGTGAGTTTTAACAAGCTGGTTGGAGAATTGCCTGAGTCCTTGGGAAGAATGAAGAGGCTGGAGCAGCTGAATGTGGCCCATAACATGTTCTCTGGCACCATTCCCGAGAGTGTTTGCATGTTGCCGAGGTTGGAGAATTTCACGTACTCTTATAACTACTTCTGCAGTGAGTCACCACTGTGTCTCAAGTTGAAGGATATGGATGACACCAAGAATTGTTTTCCTTATAGGCCATTGCAGAGGTCACCCGATGAGTGTAAGGCCTTTTATGCACATCCTGTTCATTGTAGTGCCTTTGGTTGTGTATCGCCGCCGCCGCCACCTCCACCACCACCTCCTCCTCCTCCGCCGCCACCGCCACCAGCAACTTACCACCACTATCCCTGA 1182 0.4873 MASHSPNYREGPYLIVLFLAILISIINPSHQDPSSPLPPLNPRLTKAYTALQAWKHKITSDPKNFTLNWCGPHVCNYTGIYCAPAPDDPHIYTVAGVDLNHATISGSLPEELGLLSDLSLFHINSNRFCGSLPKTFDQLHLLHELDISNNQFSGPFPEVVLCIPSLKFLDIRFNKFYGNVPPRLFDLKLDALFINNNNFQFSLPENFGNSPASVVVFANNDLKGCLPSSLAKMKGTLNEIIITNSGLTGCLPSEIGDLDKVTVFDVSFNKLVGELPESLGRMKRLEQLNVAHNMFSGTIPESVCMLPRLENFTYSYNYFCSESPLCLKLKDMDDTKNCFPYRPLQRSPDECKAFYAHPVHCSAFGCVSPPPPPPPPPPPPPPPPPPATYHHYP 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00824 393 Gene3D Ribonuclease Inhibitor 46 213 IPR032675 -
Pumo3g00824 393 SUPERFAMILY L domain-like 48 327 - -
Pumo3g00824 393 FunFam Leucine-rich repeat extensin-like protein 1 48 209 - -
Pumo3g00824 393 Gene3D Ribonuclease Inhibitor 214 342 IPR032675 -
Pumo3g00824 393 MobiDBLite consensus disorder prediction 369 393 - -
Pumo3g00824 393 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 32 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00824 Pumo-Chr3 13004637 13005818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00824 26 373 Leucine-rich Repeat extension Gene Families AT3G22800 67.335 8.22e-166 471
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00824 - - gmx:100813811 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00824 3 13004637 13005818 Pumo3g00824 3 13004637 13005818 ECH