Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00822 ATGATGGAGGGAGCTGCTATTTGTTCCACAACAGATGCCAGAGAAGAGGGTGTTGATTTGACCCAAATCTCTCTTCGACCCATTAGTCTTGATGATCTTGATGATCTCTTGTTGTGGACCGCTGATGAAAAAGTGGCAAGGTATTGCACTTGGGAACCTTACTCTAACAAAGAGGATGGCATCAACTTCATCCAAAATATAGCAAGCAAAGCTCTGTGGTTCAGAGCAATTTGCCTCAATAATCGTGCAATTGGGTGTATTGAGTTGTTCTCATGTGAGGACCAACGTAGAAACAGGCACAAATCTGTTGAACTTGGCTACGCTTTGGCCTCCAGATACTGGGGTAAAGGGATTGTAACACATGTTGTGAAACAAGTGGTTAGAACTGCATTCAGCGAGTTTCCACACTTGGAGAGGCTTCAAGCTCTGGTTGATGTGGTAAATGTGGCTTCTCAGAGGGTGCTGGAGAAGGCTGGTTTTCAAAGGGAGGGAGTTCTCAGGAAGTATGTGATCGTGAAAGGAAGAAGTATAGATATAGTTATGTTCAGTGTTCTTTCCAACGATCCTCAGTTGATTTGCTAG 582 0.4399 MMEGAAICSTTDAREEGVDLTQISLRPISLDDLDDLLLWTADEKVARYCTWEPYSNKEDGINFIQNIASKALWFRAICLNNRAIGCIELFSCEDQRRNRHKSVELGYALASRYWGKGIVTHVVKQVVRTAFSEFPHLERLQALVDVVNVASQRVLEKAGFQREGVLRKYVIVKGRSIDIVMFSVLSNDPQLIC 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00822 193 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 23 178 IPR000182 GO:0016747
Pumo3g00822 193 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 23 185 IPR016181 -
Pumo3g00822 193 Pfam Acetyltransferase (GNAT) domain 24 161 IPR000182 GO:0016747
Pumo3g00822 193 Gene3D - 11 190 - -
Pumo3g00822 193 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 19 188 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00822 Pumo-Chr3 12996751 12997638 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pumo3g00822 Acetyltransf_3 6.4e-26 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00822 - - gmx:111043201 316.62