Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00791 ATGCCCAGCCTGTTCTCCAAACACCTCCACCTCTGTTTCTTCAAGCTCAAATACCCCACCATTCTCTGCCACCCACACCACCACGACGATCAAACCCCACCACCTTCCACCGACAACTCCACCACCGACACCACCTCGTCCACGGAGCCAGACTTCGCGTCCATCTTCGCCTCGCAGCGGTTCTTCTTCTCCTCCCCGGGCACCTCCAACTCCATCGTGGAGTCCCCCGACACCCGCACCTTCATGATCCCCACAGGGGGCGGCGTCAGAGTCCCCAAGTACTCCCTCAACCCCTACGTCGATTTCCTCCGCTCAATGCACGAAATGATCCGTTCACGCCAACAAGTCTTGGACATCACCAAAGACTCCGAATATCTCCACGAACTTCTCCTATGCTACCTCGCTCTCAACCCCACACACACCCACAAGTACATCCTTCGCGCCTTCACCGACCTTGTCCTTGAACTCTTGTCCTCCACCCCGTGCCGGACGCACAACCACACCAACCACCGACGCCACCGTAGTCTCTCAGGAAGGTCGCTGTAA 546 0.5788 MPSLFSKHLHLCFFKLKYPTILCHPHHHDDQTPPPSTDNSTTDTTSSTEPDFASIFASQRFFFSSPGTSNSIVESPDTRTFMIPTGGGVRVPKYSLNPYVDFLRSMHEMIRSRQQVLDITKDSEYLHELLLCYLALNPTHTHKYILRAFTDLVLELLSSTPCRTHNHTNHRRHRSLSGRSL 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00791 181 MobiDBLite consensus disorder prediction 27 48 - -
Pumo3g00791 181 ProSiteProfiles OVATE domain profile. 91 155 IPR006458 -
Pumo3g00791 181 NCBIfam uncharacterized plant-specific domain TIGR01568 91 158 IPR006458 -
Pumo3g00791 181 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 36 157 IPR038933 GO:0045892
Pumo3g00791 181 MobiDBLite consensus disorder prediction 34 48 - -
Pumo3g00791 181 Pfam Transcriptional repressor, ovate 95 156 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00791 Pumo-Chr3 12415113 12415807 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Pumo3g00791 Ovate 3.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00791 - - gmx:102666896 253.832