Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00780 ATGAATGGTGCTGCATGTGTTGAGGGAGAGTGCTGTGAGTTTGTGGAACTTGATCCTACAGGAAGATATGGAAGATACAATGAAATTCTTGGCAAAGGAGCTTCCAAGACAGTCTATAAAGCATTTGATGAGTATGAAGGGATAGAAGTAGCATGGAATCAAGTAAAGCTTTATGACTTTTTGCAGAATCCTGAAGATCTTGAGAGGTTATACAGTGAAATTCATCTTCTCAAGACATTGAAACACAAGAACATCATGAAGTTCTATACTTCCTGGGTTGATACTGCCAACAGACACATTAACTTTGTCACTGAGATGTTTACCTCTGGGACTCTAAGACAGTACAGACTTAAACACAGACGGGTTAACATCAGAGCTGTTAAGCATTGGTGCAGGCAGATTTTGGAAGGGCTTCTCTATCTGCACAGCCATGATCCTCCAGTGATCCATAGAGATCTCAAGTGTGATAACATTTTCATCAATGGCAACCAAGGGGAAGTCAAAATTGGCGATCTTGGCCTTGCTGCAATTCTCCGCAAATCTAATGCCGCTCGCTGTGTTGGCACACCTGAGTTTATGGCTCCAGAAGTGTATGAAGAGGATTACAATGAGTTGGTTGACATATACTCTTTTGGAATGTGCATCTTAGAGATGGTCACTTTTGAATATCCTTATAGTGAATGCAACCATCCTGCTCAAATTTACAAGAAAGTTGTATCTGGGAAGAAGCCAGAAGCTCTTTTCAAAGTAGACAATCCCGAGGTTAGGCAGTTTGTAGAGAAATGCTTAGCAACTGTGTCCCTCAGACTTTCAGCTAAGGAACTCTTGGGGGACCCTTTCCTCCAAATTGATGATTATGGATTTGACTCAAAAGTAGTGCAGTATCAAAGAGATTGCTATGAAGTAACCCCATTAATTAGGCAACCTTTGAATGGAATTTATAGCATTAATAACACCTTAATGAGTGGATACACTGATAATCTTGGTGGTTATGGACCTGTATCTGAATTTGATCATCATCAAGACGATTTTGAAGCGGGTGAAATTGGTCTCTTTGATTGTGAAGAGGATGACAATTTGGCTGAAGTTGACACCACAATCAAAGGTAGGAGAAGAGAAGATGATGGCATCTTTTTGAGACTCAGAATAGCAGATAAGGAAGGTCGAATTCGAAACATCTACTTCCCATTTGACATTGAGACTGATACTGCATTGAGTGTCGCAAATGAAATGGTAGCTGAGCTCGACATAACTGACCAAGATGTAACAAAATTAGCAAATATGATAGACAATGAAATTGCAACATTGGTTCCAGAGTGGAAAACAGGACCCAGAATAGAGGAAAAATCAGAATGTTCAAATGCAAGTGTCTGCCTCAATTGTGCTGCAAACGGTTCATTGTTTGATTATGTATCATCAAATAATCCATGTGGCAAGAACCTTCAATTTCTTCATTGTTCTAAAACTGGATGTGCTGCAGTTCATGGTCGATTTGAAGAGATAACATACCAAGTTGAAGGGTCTGAAAATGGTGCCAGAGAAGGTGCACCAGATGCATCAAGCCAATCCAATGGCATTCAATATACAGATATCTGGGCTCAGAGAGATGACCCAGAGTTATGCCATGAAGAGTTAAAAGACATACACTGTGACCAAGCTCACGAGGCATCAAACTCATCAAACATCAAGGAGGATGGAAAAACCGTTAATGTGGATGAACAAAGTGATCTCAATAGCAGAAAGCCTTCTTCAAACCCTGTACCAAGTTGTGTTCTCTTGGACTATGAAAATGATATTAGGCAAGAACTAAGATGGCTCAAAGCAAAGTACCTAATGCAGTTAAGGGAGCTTAGAGACCAACAACTAGGGGGTAAACCAAAATTTACTAGCATATCTCCTAACACCGAAAAATTGGAGCATTTGAAAGATGGACTTCTGAGGCTATCAGATGCATCCAACTTGAAGATACAAAACAATAAACCACTATTGAGAACTATAGTTTCTGGGAAGCATTTTCCTGTTGAAGCTGAGAAATGCAACACTTTGGCTGATCAAATGGTTCAAAATGTTGATGAGATTCGTCGGTCTAACAGTCCTGAGCAAATGATCACAGCCAAGGATTTCTTTACAGGAGTATTGTTTCCACACGCACTTCAGAGGGCAACCTCACTTCCTGTTGATGCAGTAGATGTCTAG 2196 0.403 MNGAACVEGECCEFVELDPTGRYGRYNEILGKGASKTVYKAFDEYEGIEVAWNQVKLYDFLQNPEDLERLYSEIHLLKTLKHKNIMKFYTSWVDTANRHINFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQILEGLLYLHSHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSNAARCVGTPEFMAPEVYEEDYNELVDIYSFGMCILEMVTFEYPYSECNHPAQIYKKVVSGKKPEALFKVDNPEVRQFVEKCLATVSLRLSAKELLGDPFLQIDDYGFDSKVVQYQRDCYEVTPLIRQPLNGIYSINNTLMSGYTDNLGGYGPVSEFDHHQDDFEAGEIGLFDCEEDDNLAEVDTTIKGRRREDDGIFLRLRIADKEGRIRNIYFPFDIETDTALSVANEMVAELDITDQDVTKLANMIDNEIATLVPEWKTGPRIEEKSECSNASVCLNCAANGSLFDYVSSNNPCGKNLQFLHCSKTGCAAVHGRFEEITYQVEGSENGAREGAPDASSQSNGIQYTDIWAQRDDPELCHEELKDIHCDQAHEASNSSNIKEDGKTVNVDEQSDLNSRKPSSNPVPSCVLLDYENDIRQELRWLKAKYLMQLRELRDQQLGGKPKFTSISPNTEKLEHLKDGLLRLSDASNLKIQNNKPLLRTIVSGKHFPVEAEKCNTLADQMVQNVDEIRRSNSPEQMITAKDFFTGVLFPHALQRATSLPVDAVDV 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00780 731 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 378 433 IPR024678 GO:0004674|GO:0005524
Pumo3g00780 731 MobiDBLite consensus disorder prediction 553 571 - -
Pumo3g00780 731 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00780 731 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Pumo3g00780 731 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00780 731 Coils Coil 600 620 - -
Pumo3g00780 731 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 636 - -
Pumo3g00780 731 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Pumo3g00780 731 FunFam probable serine/threonine-protein kinase WNK9 375 459 - -
Pumo3g00780 731 CDD STKc_WNK 22 281 - -
Pumo3g00780 731 MobiDBLite consensus disorder prediction 553 585 - -
Pumo3g00780 731 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00780 731 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Pumo3g00780 731 Gene3D Phosphorylase Kinase; domain 1 10 105 - -
Pumo3g00780 731 Gene3D - 376 463 - -
Pumo3g00780 731 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Pumo3g00780 731 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00780 Pumo-Chr3 12337876 12341859 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00780 1 514 MAP Kinase Kinase Kinase AT3G22420 57.271 0.0 615
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Pumo3g00780 Pkinase 5.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00780 K08867 - gmx:100804179 1389.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00780 3 12337876 12341859 Pumo3g00780 3 12337876 12341859 ECH