Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00758 ATGGAGCTTCAGAGGCGCCAAGATCAGAGCCTCTCCCAGCGGAAGGGCCAGAAGCGGAAGCTCGACGAGGAGCAGCTCGAGGACCGCCAGATCTCGCCGGCGCCGCCCACCGCCGACGAGCGCGCCGCACTCCTCTCCGACGTCGCCGAACAGGTGAGCATCCTCGAGTCCACTTTCACCTGGAACGAAGCCGATCGATCCGCGGCCAAGCGCGCCACTCACGCGCTCGCCGATCTCGCCAAAAATGAGGATGTGGTGAACGTGATTGTTGAAGGAGGCGCTATTCCGGCTTTGGTGAAGCATCTTCAGGCGCCGCCTCTGAGTGACCGTGTCCGGAATTCTTTGCCGTTCGAGCACGAAGTTGAGAAAGGGAGCGCTTTCGCACTAGGACTTCTTGCCGTCAAGCCAGAACATCAACAGCTCATTGTTGACAGTGGTGCCTTAACACATCTTGTTGATCTTTTAAAGAGGCACAGGAGTGGCGTAACTTCTCGTGCTATTAATAGTCTCATTCGTAGAGCTGCAGATGCTATAACTAATCTTGCTCATGAGAACAGCAGCATCAAAACCCGTGTCAGGGTGGAAGGTGGAATTCCACCACTTGTTCATTTGCTTGATTTCGCCGATGCAAAGGTGCAAAGAGCAGCTGCTGGTGCTCTGCGAACCCTGGCTTTTAAAAATGATGAAAATAAAAATCAGATTGTTGAATGCAATGCTCTTCCAACTTTGATTCTAATGCTATGTTCTGAAGATGCTGCTGTTCATTATGAAGCGGTTGGTGTGATTGGAAATTTAGTCCACTCTTCACCTAATATAAAGAAAGAAGTTCTTCTTGCTGGAGCTTTACAGCCAGTTATTGGATTACTTAGCAGTTCCTGCTGCTCTGAAAGCCAGAGAGAAGCAGCCTTGTTACTTGGACAATTTGCAGCAACTGATTCAGACTGCAAGATTCACATCGTACAGAGAGGTGCTGTCCGACCTTTGATAGAGATGCTTCAGTCTCCGGATGTACAACTCAGGGAAATGTCTGCTTTTGCGTTGGGGAGATTGGCCCAGGACACACATAATCAGGCTGGTATTGCACACAATGGTGGCTTAGTGCCGTTGCTCAAGCTTCTTGACTCAAAAAATGGGTCTTTGCAACATAATGCTGCTTTTGCTCTTTATGGCCTTGCGGATAATGAGGATAATGTGTCCGATTTCATTAGGGTAGGTGGAGTTCAGAGACTGCAGGATGGAGAATTTATTGTTCAAGCAACTAAAGATTGTGTTGCCAAGACGTTGAAAAGATTAGAGGAGAAGATTCATGGCCGTGTGCTGAACCATTTGTTATATCTTATGCGAGTTTCGGATAAGAGTTGTCAAAGAAGAGTTGCTTTGGCTCTTGCACATCTTTGTTCTGCAGATGATCAGAGAAAAATTTTTATTGATCACTATGGTCTTGAGTTGCTTATTGGGCTTCTTGGCTCATCTAGCTCTAAGCAGCAACTTGATGGTGCTGTGGCTTTATGCAAGTTGGCCAATAAAGCCTCAACCCTGTCTCCTGTGGATGCTGCTCCTCCTTCTCCAACACCACAGGTAAATCCAGTTGGCTTGTCATCAGTTTTCACAATTTCACTGCCTAGAGTTTAA 1632 0.4773 MELQRRQDQSLSQRKGQKRKLDEEQLEDRQISPAPPTADERAALLSDVAEQVSILESTFTWNEADRSAAKRATHALADLAKNEDVVNVIVEGGAIPALVKHLQAPPLSDRVRNSLPFEHEVEKGSAFALGLLAVKPEHQQLIVDSGALTHLVDLLKRHRSGVTSRAINSLIRRAADAITNLAHENSSIKTRVRVEGGIPPLVHLLDFADAKVQRAAAGALRTLAFKNDENKNQIVECNALPTLILMLCSEDAAVHYEAVGVIGNLVHSSPNIKKEVLLAGALQPVIGLLSSSCCSESQREAALLLGQFAATDSDCKIHIVQRGAVRPLIEMLQSPDVQLREMSAFALGRLAQDTHNQAGIAHNGGLVPLLKLLDSKNGSLQHNAAFALYGLADNEDNVSDFIRVGGVQRLQDGEFIVQATKDCVAKTLKRLEEKIHGRVLNHLLYLMRVSDKSCQRRVALALAHLCSADDQRKIFIDHYGLELLIGLLGSSSSKQQLDGAVALCKLANKASTLSPVDAAPPSPTPQVNPVGLSSVFTISLPRV 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00758 543 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 93 147 IPR000225 GO:0005515
Pumo3g00758 543 Pfam Armadillo/beta-catenin-like repeat 227 266 IPR000225 GO:0005515
Pumo3g00758 543 Pfam Armadillo/beta-catenin-like repeat 192 224 IPR000225 GO:0005515
Pumo3g00758 543 Pfam Armadillo/beta-catenin-like repeat 312 351 IPR000225 GO:0005515
Pumo3g00758 543 SUPERFAMILY ARM repeat 57 411 IPR016024 -
Pumo3g00758 543 Gene3D - 413 527 IPR011989 -
Pumo3g00758 543 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 196 231 IPR000225 GO:0005515
Pumo3g00758 543 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 323 365 IPR000225 GO:0005515
Pumo3g00758 543 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 1 527 IPR044282 -
Pumo3g00758 543 MobiDBLite consensus disorder prediction 1 29 - -
Pumo3g00758 543 SMART arm_5 135 183 IPR000225 GO:0005515
Pumo3g00758 543 SMART arm_5 227 267 IPR000225 GO:0005515
Pumo3g00758 543 SMART arm_5 468 508 IPR000225 GO:0005515
Pumo3g00758 543 SMART arm_5 353 393 IPR000225 GO:0005515
Pumo3g00758 543 SMART arm_5 269 310 IPR000225 GO:0005515
Pumo3g00758 543 SMART arm_5 82 134 IPR000225 GO:0005515
Pumo3g00758 543 SMART arm_5 185 225 IPR000225 GO:0005515
Pumo3g00758 543 SMART arm_5 312 352 IPR000225 GO:0005515
Pumo3g00758 543 Gene3D - 38 207 IPR011989 -
Pumo3g00758 543 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 364 406 IPR000225 GO:0005515
Pumo3g00758 543 SUPERFAMILY ARM repeat 438 507 IPR016024 -
Pumo3g00758 543 Gene3D - 208 412 IPR011989 -
Pumo3g00758 543 MobiDBLite consensus disorder prediction 1 38 - -
Pumo3g00758 543 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 146 196 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00758 Pumo-Chr3 12061358 12065342 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00758 185 392 U-box Gene Family AT5G67340 27.885 4.43e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00758 - - gmx:100784348 947.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00758 3 12061358 12065342 Pumo3g00758 3 12061358 12065342 ECH