Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00757 ATGCTTGCTGTTTTACATGCTTGCCATTTGCATAAAAATCCTGATGCCAAGCTCCCTCTTCACTCCGCCTTGGCTAAATTATTCTGGAATAAGGATTTTCTAAAAGCTGGCAAACGATTCTATGCTCATAGAATTTGTCTACTTGCATCTTCAGATGCATTTCGTGCAATGTTCGATGGTGGTTACAGGGAGAAGGAGGCAAGGGACATAGAGATTCCAAATATTAGATGGGAGGTTTTTGAGTTGATGATGAGATTTGTATATTGTGGATCAGTTGATGTCACTCTGGATATTGCTCAAGATCTTCTTCGAGCAGCCGATCAATATCTTTTGGAAGGACTTAAGAGACTCTGTGAGTACACAATTGCGCAGGATATATCGTTAGAGAATGTGTCAAGTATGTATGAACTTTCAGAAGCCTTCAATGCAATATCACTGAGGCATGCATGCATCCTTTTTATCTTGGAGCAATTTGATAAATTGAGTGCAAGGCCAGGGCACTCTCTTCTGATTCAGCGTATAATACCAGAGATCCGCAATTACTTTGTTAAAGCTCTTACAAAGGCCAACTCTCATAACAACCTGACTGTAGAAGGGGTGTCTCCGTTATGCATTCACACAGTCGTGAACCAGTACATAGATAAAGATTATGTGTTTTCTGTGTTTGGGTCTAGCAGTGGTTAA 684 0.405 MLAVLHACHLHKNPDAKLPLHSALAKLFWNKDFLKAGKRFYAHRICLLASSDAFRAMFDGGYREKEARDIEIPNIRWEVFELMMRFVYCGSVDVTLDIAQDLLRAADQYLLEGLKRLCEYTIAQDISLENVSSMYELSEAFNAISLRHACILFILEQFDKLSARPGHSLLIQRIIPEIRNYFVKALTKANSHNNLTVEGVSPLCIHTVVNQYIDKDYVFSVFGSSSG 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00757 227 Gene3D Potassium Channel Kv1.1; Chain A 11 156 IPR011333 -
Pumo3g00757 227 ProSiteProfiles BTB domain profile. 14 96 IPR000210 GO:0005515
Pumo3g00757 227 PANTHER ARM REPEAT PROTEIN INTERACTING WITH ABF2 33 191 IPR044282 -
Pumo3g00757 227 Pfam BTB/POZ domain 37 124 IPR000210 GO:0005515
Pumo3g00757 227 SMART BTB_4 30 126 IPR000210 GO:0005515
Pumo3g00757 227 SUPERFAMILY POZ domain 33 123 IPR011333 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00757 Pumo-Chr3 12057293 12060934 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pumo3g00757 BTB 6.8e-21 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00757 - - vum:124847329 315.464