Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00748 ATGCAAGACTTTTTGGGCTCCCTTCGCCACTCCTTGGTTTTCCGACACGGCGGTGACGATGCTCCTTTCGCCAGAATCGCCGACAAGCTTGGCTCCGCCATTCGCAAATCGCGAATCGCACTCAAACCTCCTCCTCCTCCTCCGATACGGTGGCGCAAGGGCCAGTTGATCGGTTCCGGCGCCTTCGGTCACGTCTACATGGGAATGAACCTCGATTCCGGGGAGCTTATTGCCATCAAACAGGTTTTAATAGCACCTGGTAGCGCTTCCAAGGAGAATACACAGGCTAATATTCGGGAGCTCGAAGAAGAAGTCAAGCTTCTCAAGAATCTTAAGCATCCAAACATTGTTAGATACTTGGGAACTGCTAGAGAGGAGGATTCCTTAAATATTCTGCTGGAGTTTGTACCTGGTGGATCTATCTCATCGCTCCTAGGGAAATTTGGATCCTTCCCTGAATCCGTTATAAAAATGTATACAAAACAGCTTTTACTAGGCCTTGAATATCTTCACAATAACGGGATCATTCATAGGGATATTAAGGGTGCCAACATTCTAGTTGATAACAAAGGGTGCATTAAACTCGCAGACTTTGGTGCATCCAAGAAAGTTGTTGAACTGGCTACCATCAATGGTGCAAAGTCAATGAAGGGTACACCAGCATTGGATACAGGACATACGATCTCTACTGATATATGGAGTGTTGCATGCACTGTGATAGAGATGGCCACAGGAAAGCCTCCATGGAGTCAACAATATCCCCAGGAGGTTTCGGCTATTTTCTATATCGGGACAACTAAATCTCATCCACCCATACCTGAACATCTGTCTGCTGAGGCAAAGGACTTTTTGCTGAAATGCTTCCACAAGGAACCAAATTTAAGGCCTTCTGCATCCGAATTGTTACAGCATCCATTCATCACCTGCGACTATCATGAATCTCATTCAATATTACGCAGTTCAATCAGGGACTCTTGCAATAAGACGGCAATATATGGGATGAACTCTAGAAACTTCTTGGATTCTGTCCAGGGATCAACTTGCACAGGCTTAAAGGATGTTTGTCAGATAGATAGCATAAGGTTCTCAACTGTATATCATAAAGCAGATTCCTACCAGAGAGCAGACAACAATGAGGATGACATGTGTCAGATGGATGAAGATGATTTTTTGATTGATTCATCAGTAAAATCTGAAGCACTATTGGCTTCTGATGATATGAAGAGTTGCAATCCTATGTGCAAACCAGTGGATGACCGGCCTTGCAATTTTGATGAAACCCAATATTTGGAGAAAAGCAGACCAAACTTGTCATTTTCAAGTGAGCCTCTAGGAACTGAAGATGATGATGAAGTTACTGAGTCTAAAATTAGAGCCTTCCTGGATGATAAGGCCCTTGAACTGAAGAAGCTCCAAACACCTCTTTATGAAGAATTCTTAAACATATCAAATGCAGCCATTGCTCCTGCTCCCGTAGGAGTTGCAAAGAGTAAAGTTATTTCGGATGTCTCAAATGTAACATCATCAAAAGGCAGGTCTCCTAGTCTGGCTTGGAGACGATTCTCAATGGTTGGCAGTGCTAATGCTGCAAGCCCCGAGAGTCATGCCAAATACCGATCAAAGCTTAGTGGTGCTCACTGTCGACCTTTGCAGGAAATTCAGCCATCTGAGCTTAATGAATCAAAGGAGGCTCTTTATGATGCTGAGCTGGAATCATCTAGTGTAAGCTCAAGCTTCTCTGATGAGAGGCAAAGGAAATGGAAAGAAGAATTGGTTGAAGAGCTTGAGTGGAAACGAGAGATGATGCGTCAGGGCGGAATTGGAGGGAAGATAACATCTCCAAAGGATCGCAAATTTTATGGAGACTGA 1869 0.4403 MQDFLGSLRHSLVFRHGGDDAPFARIADKLGSAIRKSRIALKPPPPPPIRWRKGQLIGSGAFGHVYMGMNLDSGELIAIKQVLIAPGSASKENTQANIRELEEEVKLLKNLKHPNIVRYLGTAREEDSLNILLEFVPGGSISSLLGKFGSFPESVIKMYTKQLLLGLEYLHNNGIIHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPALDTGHTISTDIWSVACTVIEMATGKPPWSQQYPQEVSAIFYIGTTKSHPPIPEHLSAEAKDFLLKCFHKEPNLRPSASELLQHPFITCDYHESHSILRSSIRDSCNKTAIYGMNSRNFLDSVQGSTCTGLKDVCQIDSIRFSTVYHKADSYQRADNNEDDMCQMDEDDFLIDSSVKSEALLASDDMKSCNPMCKPVDDRPCNFDETQYLEKSRPNLSFSSEPLGTEDDDEVTESKIRAFLDDKALELKKLQTPLYEEFLNISNAAIAPAPVGVAKSKVISDVSNVTSSKGRSPSLAWRRFSMVGSANAASPESHAKYRSKLSGAHCRPLQEIQPSELNESKEALYDAELESSSVSSSFSDERQRKWKEELVEELEWKREMMRQGGIGGKITSPKDRKFYGD 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00748 622 SUPERFAMILY Protein kinase-like (PK-like) 50 308 IPR011009 -
Pumo3g00748 622 Pfam Protein kinase domain 52 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00748 622 FunFam Mitogen-activated protein kinase kinase kinase 2 50 335 - -
Pumo3g00748 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Pumo3g00748 622 ProSiteProfiles Protein kinase domain profile. 51 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00748 622 ProSitePatterns Protein kinases ATP-binding region signature. 57 80 IPR017441 GO:0005524
Pumo3g00748 622 FunFam Serine/threonine-protein kinase STE11 48 141 - -
Pumo3g00748 622 CDD STKc_MAPKKK 50 307 - -
Pumo3g00748 622 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 45 320 - -
Pumo3g00748 622 Coils Coil 91 111 - -
Pumo3g00748 622 SMART serkin_6 51 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00748 622 Gene3D Transferase(Phosphotransferase) domain 1 50 338 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00748 Pumo-Chr3 11894925 11903953 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00748 1 610 MAP Kinase Kinase Kinase AT3G06030 54.697 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pumo3g00748 Pkinase 2.9e-62 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00748 - K20606 gmx:100795863 1093.57