Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00744 ATGATGCGTTTTTTGCACAAGGTTAAGGGATGGAAAAAAAATAAGTCTGTTGTCTCTAAGAAATTTGTAACAGTGACTATGGTTAGGGTTAGTGTCTTGAATGATGCTATTAAGAGCATGTACAATGCTGAGAAACGGGGAAAGCGCCAGTATACTCTGTTGGTTCTAGGATACATAGGGGAGTTCGAATATGTTGATGATCACAGGGCTGGCAAAATTGTGGTAGAATTGAATGGTAGATTAAACAAGTGTGGTGTCATTAGTCCCCACTTTGATGTTGGTGTCAAAGAGATAGAGGGTTGGACTGCAAGGTTACATCCCTCAAGACATATAGAAAAGGAAAGTGAGAAAATACGGAGAAGACAACTAACAATGCCATGTATTAGTGATGTTCTTCTAATGTGGCGGTCTACAAATTACACAAGTGTTTTATTCTCAGTGTTTAGAGATCGCTGA 456 0.3904 MMRFLHKVKGWKKNKSVVSKKFVTVTMVRVSVLNDAIKSMYNAEKRGKRQYTLLVLGYIGEFEYVDDHRAGKIVVELNGRLNKCGVISPHFDVGVKEIEGWTARLHPSRHIEKESEKIRRRQLTMPCISDVLLMWRSTNYTSVLFSVFRDR 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00744 151 PANTHER 40S RIBOSOMAL PROTEIN S15A 27 110 IPR000630 GO:0003735|GO:0005840|GO:0006412
Pumo3g00744 151 Gene3D - 82 112 - -
Pumo3g00744 151 Gene3D - 27 54 - -
Pumo3g00744 151 Gene3D - 55 81 - -
Pumo3g00744 151 SUPERFAMILY Ribosomal protein S8 30 110 IPR035987 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00744 Pumo-Chr3 11867513 11869163 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00744 27 110 Cytoplasmic Ribosomal Protein Gene Family AT5G59850 75.510 3.27e-46 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00744 K02957 - gmx:100798674 143.665