Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00727 ATGGGTTCTTTTCATTTGTTCATTTTGCTCTCAACTTTCTTTTCCCTCTTTGTTCATTGCTCTCCTTCTCCTATCATCCAAGCAGCTATCCATCAAGGTCCCAAAGCCTACTATAACTGCACAAGGAACAGCACTTTTGCTGCCTATAGCGCTTTCCGTTCTAACATCAAAACACTCCTAGATTGGCTCTCCTCCAATGGCACCAACAATGCCAAATTCTACAACACTACAGTTTCTAGCGAAGACACTGCAGACACTGTTTATGGTAGCTTCCTTTGTACAATAGACACCATTCCAAAACACTGCCAAGAATGCGTGACACAAGCTGCCAAACTCATACCATCGCTTTGCACCATGGCAAAAGAGGCTATTGTATGGTACCAAGTATGCTATGTGCGCTACTCTGATCGTCGTTTCTTCTCCACCATGGAGGAGAGTCCTAAACTCTCCTTTATGAATGATCAGGATTATGTGGGTAACGTTGGGCGCTTCAACAATATTGTGTGGGATATGATGAACGATTTGAGAAGTGAGGCAGCAGGTGCTTCTAATAAATCGGCTGATAAGTCTATGAACATCACAGATAATCAAAAGGTATATGGCTACGCTTGGTGCCTCCCATACATGTCCAAAGAGAACTGCAGCTGGTGTCTTAGCGATGCCATAGCAGAAATTCCAACCGGTTGCTGCAGAGGAAAATCTGGGGGAACAATATTATATCCCAGTTGTGGTGTTAGATACGAATTATATCAATTCCACAAGGCACATATCAGGGATGGTTCGGTGTCGCCGCCACCACTTCCCAATAGTCCTTCCCCTTTTGTTTCACCAGGGAAAAGAAAACAGAAGGCACTAACAATAATTGTGATCGTAGTTCCAATTGTTGTTTCACTGGTGCTTCTAGCTTTGGGATACTGCTGCTTTTTACATCGAAAAGAAGCAAAGAATCAACATGATATTCTCAAAGAAAGCTTTGGGAATGACAGTACGATTTTGGAGTCCTTGCGATTTGAACTAGCTAAAATTGAAGCTGCAACAAACAGATTTGCTAAAGAAAACATGATAGGCAAAGGTGGATTTGGAGAGGTCTACAGGGGTATTCTTTCAGATGGACAAGAAATAGCAGTGAAGAGGCTTACTGGAAGCTCCCGGCAAGGAGCAGTGGAGTTTAAAAATGAGGTTCAGGTTATAGCAAAGCTTCAACACAGAAATCTAGTGAGGTTATTAGGATTTTGCTTAGAAGATGACGAAAAGATACTCATTTATGAGTACGTGCCAAACAAGAGTCTTGATTATTTTTTATTGGATACCAAGAAGCGAAGACTACTATCTTGGTCTGAACGTATGAAGATTATTAGAGGAATTGCTCGAGGAATTCTATATCTACATGAGGATTCTTGCCTCAAAATAATACATCGTGATTTAAAACCTAGTAATGTTTTGTTAGACAGTAATATGAATCCAAAAATCTCAGATTTTGGCATGGCTAGAATTGTTGCTGCAGATCAAATTGAAGAAAGTACGGGCAGAATCGTAGGGACATATGGTTATATGTCTCCAGAATATGCAATGCATGGACAATTTTCTGTGAAATCTGATGTGTTTAGTTTTGGAGTTATGGTTCTAGAGATTATCAATGGAAAGAGGAAAGGTTGTTCTTCTGAATCAGAGGGTATTGATGACATCCGGAGACATGCTTGGATGAAATGGACAGAGCAAATGCCATTGGAACTATTGGATCATAACATAGGAGGACCTTATTCCCGAGAAGAAGTCATCAAATGCATCCACATTGGTTTGTTATGTGTTCAAGAAGATCCAAATGATAGACCTACAATGGCAACAGTTTTGTTTTACCTCAACAGCCCTTCAATCAACTTGCCTCCCCCTCGTGAACCAGGATATTTTAAGCGTGATAGAAGAGAAGATAACAAGACGACCAACAAAGAATTGGATAATACCAGTGATTCCATCAACGGAATTACTTTAACTAATTTCTTTCCTCGTTAA 2010 0.4045 MGSFHLFILLSTFFSLFVHCSPSPIIQAAIHQGPKAYYNCTRNSTFAAYSAFRSNIKTLLDWLSSNGTNNAKFYNTTVSSEDTADTVYGSFLCTIDTIPKHCQECVTQAAKLIPSLCTMAKEAIVWYQVCYVRYSDRRFFSTMEESPKLSFMNDQDYVGNVGRFNNIVWDMMNDLRSEAAGASNKSADKSMNITDNQKVYGYAWCLPYMSKENCSWCLSDAIAEIPTGCCRGKSGGTILYPSCGVRYELYQFHKAHIRDGSVSPPPLPNSPSPFVSPGKRKQKALTIIVIVVPIVVSLVLLALGYCCFLHRKEAKNQHDILKESFGNDSTILESLRFELAKIEAATNRFAKENMIGKGGFGEVYRGILSDGQEIAVKRLTGSSRQGAVEFKNEVQVIAKLQHRNLVRLLGFCLEDDEKILIYEYVPNKSLDYFLLDTKKRRLLSWSERMKIIRGIARGILYLHEDSCLKIIHRDLKPSNVLLDSNMNPKISDFGMARIVAADQIEESTGRIVGTYGYMSPEYAMHGQFSVKSDVFSFGVMVLEIINGKRKGCSSESEGIDDIRRHAWMKWTEQMPLELLDHNIGGPYSREEVIKCIHIGLLCVQEDPNDRPTMATVLFYLNSPSINLPPPREPGYFKRDRREDNKTTNKELDNTSDSINGITLTNFFPR 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00727 669 FunFam cysteine-rich receptor-like protein kinase 10 425 627 - -
Pumo3g00727 669 FunFam Cysteine-rich receptor-like protein kinase 5 36 139 - -
Pumo3g00727 669 ProSiteProfiles Gnk2-homologous domain profile. 145 252 IPR002902 -
Pumo3g00727 669 ProSitePatterns Protein kinases ATP-binding region signature. 355 377 IPR017441 GO:0005524
Pumo3g00727 669 Pfam Protein kinase domain 350 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00727 669 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 310 424 - -
Pumo3g00727 669 MobiDBLite consensus disorder prediction 629 656 - -
Pumo3g00727 669 Gene3D Transferase(Phosphotransferase) domain 1 425 626 - -
Pumo3g00727 669 ProSiteProfiles Protein kinase domain profile. 349 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00727 669 MobiDBLite consensus disorder prediction 633 650 - -
Pumo3g00727 669 Pfam Salt stress response/antifungal 40 136 IPR002902 -
Pumo3g00727 669 Pfam Salt stress response/antifungal 160 250 IPR002902 -
Pumo3g00727 669 Gene3D - 34 139 IPR038408 -
Pumo3g00727 669 Gene3D - 148 252 IPR038408 -
Pumo3g00727 669 Gene3D Phosphorylase Kinase; domain 1 310 424 - -
Pumo3g00727 669 ProSiteProfiles Gnk2-homologous domain profile. 34 139 IPR002902 -
Pumo3g00727 669 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 39 662 - -
Pumo3g00727 669 SMART serkin_6 349 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00727 669 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672|GO:0006468
Pumo3g00727 669 CDD STKc_IRAK 355 621 - -
Pumo3g00727 669 SUPERFAMILY Protein kinase-like (PK-like) 332 636 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00727 Pumo-Chr3 11580866 11584051 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00727 12 669 Receptor kinase-like Gene Family AT4G05200 44.118 0.0 561
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo3g00727 Pkinase 4.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00727 - - gmx:100793219 1205.28