Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00722 ATGATTACCAAGTCCAACAACGTCAACAGTCTAATACTGTTCCTACTCTGCACCCTTGTGCTCACCGTTACAGAAACCTCGGCATCAGTGTTCAACAACGTTAGCTGCACGAGCAACAAGACTTTCACTCCAAACAGCACCTTCAACACCAACCTCAACACCCTTCTCTCCTACCTTTCCTCAAACGTCACCAACAACGTTAGATTCTTCAACGCCACCGCAGGGAAAGATGCTGACTCCGTCTATGGCCTCTACATGTGCCGTGGAGACGTACCATTCGCTCTATGCAGAGAGTGTGTGGGTTTTGCAACACAAACCATTGCCTCGTCATGTCCCACATCGAAAGAAGCTTTGATTTGGTACAACGAGTGTTCGTTACGCTACTCTTATAGGTTCATCTTCTCTAAAATGGAAGAGTGGCCACGGCACCAGATCAATATCCCGTTGGGGGACCCTGTGGTTTTGCACAGTAGTGGATTCTACACTGCGTTAGGTTCCATTTTCGATGAACTACCAAATGAGGCAGCACTGGCTCTTAATGGTAGTGGGTCTAATCCATATGCCGTTAAGCAAGAAAACGCTTCTGCAAGTGTCACCCTGTACGGTCTCGCTCAGTGCACGCCGGACTTGGCTGCCGGAGACTGCAAACGGTGTGTCGCCGATGCGGCGGCGGAGTTTGTCAAGTCTTGTTGCGGAGGGAGCATAGGGGCAACTGTTCTGTTTCCCAGTTGCTTTGTTCGATATGAAACGTATCCGTTTTATCAGCATTCGGGAACCTCCGCGCCAACAATGATTAAGCGTGGAGGAAATATTGGAACTGAAGTGATTGTGATCGTTGTTGTCTTGGTTGTCGTTTTGGCGATGCTTTTTGGCTTTGGCTATTGTTTCATCCGGATAAAAGCGAGAAAGAAACAAAAGACCAGTGACACAGAAAACTTTGGGCCAGAAATCACTGTCTTGGAGTCCTTGGAATTTGATTTGGCTACAATTGAAGCAGCCACAAACAAGTTTTCTGAAGACCGCAGGATTGGCAAAGGAGGTTATGGAGAAGTCTACAAGGGAACCCTTCCTAATGGAGAAGAAGTAGCTGTAAAGAGATTGTCAACAACTTCTAAACAAGGAGTGGAGGAATTCAAAAATGAAGTGTTGTTAATAGCTAAACTTCAACACAAAAATTTGGTGAGGTTAATAGGATTTTGCCAAGAAGACAGAGAGAAAATTCTTATTTATGAATATGTGCCCAACAAGAGTCTGGACCACTTCCTATTTGATCCCCAAAAGTACAGACAATTAACTTGGCCGGAGCGGTATAAAATCATAAAAGGCATTGCAAGAGGTATTCTTTATCTTCATGAAGATTCTCGTCTTAAGATTATACACCGTGATATCAAGCCAAGCAATGTTTTATTGGACAATGGCATCAATCCAAAAATCTCTGATTTTGGAATGGCAAGGTTGGTAGCTACAGACCAAATTCAAGGATGTACGAATAGAGTTGTGGGCACATATGGTTATATGTCTCCTGAATATGCAATGCATGGAAAATTTTCTGAGAAGTCTGATGTGTTCAGTTTTGGAGTTATGGTTCTTGAGATTATTAGTGGGAAGAAGAACACTTATTCTTTTGAATCATGCCGTGTTGATGACCTCTTGAGTTATGCATGGAATAACTTGAGGGATGAATCACCATTTCAATTGCTGGAACCAACTCTGCTAGAATCTTATGTTCCAAACGAAGTTGAAAAGTGTATGCAGATTGGTTTATTGTGTGTGCAAGAAAATCCAGATGACAGGCCTACAATGGGAACCATTGTTTCATATCTTAGCAACCCTTCACTTGAAATGCCATTCCCTCTAGAACCAGCGTTTTTCATGCATGGCAGAATGAGAAGACATTCAGCTGAACATGGATCATCAGAATTTACCCTGAAAAAATATTGGAAAGAATTGATGGGATGA 1959 0.4308 MITKSNNVNSLILFLLCTLVLTVTETSASVFNNVSCTSNKTFTPNSTFNTNLNTLLSYLSSNVTNNVRFFNATAGKDADSVYGLYMCRGDVPFALCRECVGFATQTIASSCPTSKEALIWYNECSLRYSYRFIFSKMEEWPRHQINIPLGDPVVLHSSGFYTALGSIFDELPNEAALALNGSGSNPYAVKQENASASVTLYGLAQCTPDLAAGDCKRCVADAAAEFVKSCCGGSIGATVLFPSCFVRYETYPFYQHSGTSAPTMIKRGGNIGTEVIVIVVVLVVVLAMLFGFGYCFIRIKARKKQKTSDTENFGPEITVLESLEFDLATIEAATNKFSEDRRIGKGGYGEVYKGTLPNGEEVAVKRLSTTSKQGVEEFKNEVLLIAKLQHKNLVRLIGFCQEDREKILIYEYVPNKSLDHFLFDPQKYRQLTWPERYKIIKGIARGILYLHEDSRLKIIHRDIKPSNVLLDNGINPKISDFGMARLVATDQIQGCTNRVVGTYGYMSPEYAMHGKFSEKSDVFSFGVMVLEIISGKKNTYSFESCRVDDLLSYAWNNLRDESPFQLLEPTLLESYVPNEVEKCMQIGLLCVQENPDDRPTMGTIVSYLSNPSLEMPFPLEPAFFMHGRMRRHSAEHGSSEFTLKKYWKELMG 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00722 652 Gene3D Phosphorylase Kinase; domain 1 297 412 - -
Pumo3g00722 652 ProSiteProfiles Gnk2-homologous domain profile. 30 133 IPR002902 -
Pumo3g00722 652 ProSiteProfiles Protein kinase domain profile. 337 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00722 652 FunFam cysteine-rich receptor-like protein kinase 10 413 615 - -
Pumo3g00722 652 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 23 633 - -
Pumo3g00722 652 Gene3D Transferase(Phosphotransferase) domain 1 413 614 - -
Pumo3g00722 652 FunFam Cysteine-rich receptor-like protein kinase 10 299 412 - -
Pumo3g00722 652 SUPERFAMILY Protein kinase-like (PK-like) 323 630 IPR011009 -
Pumo3g00722 652 Pfam Salt stress response/antifungal 158 251 IPR002902 -
Pumo3g00722 652 Pfam Salt stress response/antifungal 36 129 IPR002902 -
Pumo3g00722 652 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Pumo3g00722 652 Pfam Protein tyrosine and serine/threonine kinase 340 608 IPR001245 GO:0004672|GO:0006468
Pumo3g00722 652 ProSiteProfiles Gnk2-homologous domain profile. 141 253 IPR002902 -
Pumo3g00722 652 ProSitePatterns Serine/Threonine protein kinases active-site signature. 458 470 IPR008271 GO:0004672|GO:0006468
Pumo3g00722 652 SMART serkin_6 337 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00722 652 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 29 133 - -
Pumo3g00722 652 CDD STKc_IRAK 343 608 - -
Pumo3g00722 652 FunFam Putative cysteine-rich receptor-like protein kinase 9 153 253 - -
Pumo3g00722 652 Gene3D - 153 253 IPR038408 -
Pumo3g00722 652 Gene3D - 29 132 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00722 Pumo-Chr3 11495478 11502007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00722 9 639 Receptor kinase-like Gene Family AT4G05200 43.731 0.0 539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo3g00722 PK_Tyr_Ser-Thr 1.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00722 - - gmx:100791642 1117.06