Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00715 ATGAAACGCGAAAGATGTTTGTTTCCCGCCACTATGTTACATGTTGTTTGCTACTTACTAGCAATTGGATCATCGTTAGCTCTCACTTACAACGCCAATTACTGTCCAAACAACACAACACACCAATTCAGCACCGGATTCCAAACCAACCTCAGAATCCTCCTCACTTCTCTCACCTCTAACGCCTCCCTGGGCCGCGACGCCTCCTACCAAACTTCCATAGGTATGCCGTCCTCAGACCAGGCCAGCGGCGTCTTCCTCTGCCGCGGCGACGTCTCCCCCGTCACGTGTAAGGAATGCGTCGCCGCGGCAGCCACGGAAATAAGACGCCGCTGCCGCAACCAAACAGAGTCCATAATATGGTACGACGAGTGCATGGTTGCCTACACAAACGACTGGTACGATCCCATGGGCATGGATCCGAGAGAGATCTTGAGGGACAACAAGAGCGTCTCTGCCTCGGATTTCGAAGGCTTCAATCAAACGTTGTTTGCGTTGTTGAACGGTTTGGTTGAAGAAGCCGCGAATTCCCAGTCAACGCGGAAATTCGCGACCGGGGAAGCGGGGGTCAGGGTTGGTTCCTCGCGGCGGGTGTACGGCCTGGCGCAGTGCGTGCCCAGCGCCTCGAATAACCAGTGTGAGAAGTGTTTGAAAAATTGTATTGAAACTCTTTTTTCCGCGTGTTGTGAAGTAAAACAGGGCGCAAGAGCTCTGCTTGCATGGTGTAATATCAGATACGAATTGTACCAGTTTTACAACACAACTGGGACATCAACGTCGCCAGTGCTTCCTTCTTCTCCTCCTCCTTCAGGAAAAAAGAAATCTGGACCGCGAAAAGTTGTTTTGATTTCTGTCCTTGTTCCCCTTTCGATAATTCTCTTGTTTTCTGTCTGCTATTTTCTATTGAGAAGAACAAGGAAAAATAACTACAAGATTCGTCTTCTACGAGAAAATTTTGGAGATGAAAGTGCCACGTTGGAGTTGCTACAATTCAATTTGGCCACAATTGAGGCTGCTACAAATAAGTTTTCTTCTGAAAACGAAATAGGCAAAGGTGGATTTGGAGAGGTTTACAAGGGAATTTTAATAGATGGACAAGAAATAGCTGTAAAAAAATTGTCGCAAAGTTCAAGACAAGGTGCAGTGGAATTTAAGAATGAAGTTTTGCTAATAGCTAAGCTTCAGCATAGAAATCTAGTGACATTATTAGGATTTTGCTTGGAAGCACAAGAGAAAATGCTCATTTATGAGTTTGTGCCCAATAAAAGCCTTGATTACTTTTTATTCGATCTTCATAAAAGTAGATCGTTGAACTGGTTTGAGCGTTACAAGATAATTAAAGGAATTGCACGAGAAATTCTTTATTTACATGATCATTCAAGGTTAAAAGTTATACACCGTGATCTCAAACCAAGTAATGTGTTGTTAGATGACAATATGAATCCAAAAATCTCAGACTTTGGCATGGCAAGGATGATTGCTATAGATCAAGATCGAGGAAATACAAATACAGTTGTTGGAACTTTCGGTTATATGTCTCCAGAATATGTAAAACGTGGACAATTTTCAGAAAAATCAGACGTCTTTAGTTTTGGAGTCATTGTTTTGGAGGTTATTAGTGCAAAAAGAAATGCTCGTCCTCTTGTATCATTCGATGATGACGACCTTTTGAGTTACGTGAAGAACGCCACTGCCTACGGAGAAGACCTGAGTTGTGTATCTCAAGAGAAACCTCCCATAAGCCTTTGCCCTAATGTGAACGTGAGGATTGGTCCTCCGTCTGACATGTCAGGGCATGGTGTCCCCTTGTCTTGTTGCCACGTTCTTATGCTGCAATGTCGTCTTACCTCTGACATGTCAGAGTGTGGTGTTCTTTGTTGGGTGTCAGAAGTTGTTTAG 1899 0.4397 MKRERCLFPATMLHVVCYLLAIGSSLALTYNANYCPNNTTHQFSTGFQTNLRILLTSLTSNASLGRDASYQTSIGMPSSDQASGVFLCRGDVSPVTCKECVAAAATEIRRRCRNQTESIIWYDECMVAYTNDWYDPMGMDPREILRDNKSVSASDFEGFNQTLFALLNGLVEEAANSQSTRKFATGEAGVRVGSSRRVYGLAQCVPSASNNQCEKCLKNCIETLFSACCEVKQGARALLAWCNIRYELYQFYNTTGTSTSPVLPSSPPPSGKKKSGPRKVVLISVLVPLSIILLFSVCYFLLRRTRKNNYKIRLLRENFGDESATLELLQFNLATIEAATNKFSSENEIGKGGFGEVYKGILIDGQEIAVKKLSQSSRQGAVEFKNEVLLIAKLQHRNLVTLLGFCLEAQEKMLIYEFVPNKSLDYFLFDLHKSRSLNWFERYKIIKGIAREILYLHDHSRLKVIHRDLKPSNVLLDDNMNPKISDFGMARMIAIDQDRGNTNTVVGTFGYMSPEYVKRGQFSEKSDVFSFGVIVLEVISAKRNARPLVSFDDDDLLSYVKNATAYGEDLSCVSQEKPPISLCPNVNVRIGPPSDMSGHGVPLSCCHVLMLQCRLTSDMSECGVLCWVSEVV 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00715 632 FunFam Lectin-domain containing receptor kinase A4.3 419 576 - -
Pumo3g00715 632 Gene3D Phosphorylase Kinase; domain 1 307 418 - -
Pumo3g00715 632 MobiDBLite consensus disorder prediction 257 276 - -
Pumo3g00715 632 ProSiteProfiles Gnk2-homologous domain profile. 29 134 IPR002902 -
Pumo3g00715 632 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 303 418 - -
Pumo3g00715 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Pumo3g00715 632 SMART serkin_6 343 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00715 632 ProSiteProfiles Protein kinase domain profile. 343 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00715 632 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 76 558 - -
Pumo3g00715 632 Gene3D - 28 133 IPR038408 -
Pumo3g00715 632 Gene3D - 144 251 IPR038408 -
Pumo3g00715 632 FunFam Cysteine-rich receptor-like protein kinase 10 142 251 - -
Pumo3g00715 632 Pfam Protein kinase domain 344 542 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00715 632 ProSiteProfiles Gnk2-homologous domain profile. 139 251 IPR002902 -
Pumo3g00715 632 Gene3D Transferase(Phosphotransferase) domain 1 419 613 - -
Pumo3g00715 632 SUPERFAMILY Protein kinase-like (PK-like) 320 573 IPR011009 -
Pumo3g00715 632 Pfam Salt stress response/antifungal 154 249 IPR002902 -
Pumo3g00715 632 Pfam Salt stress response/antifungal 35 131 IPR002902 -
Pumo3g00715 632 ProSitePatterns Protein kinases ATP-binding region signature. 349 372 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00715 Pumo-Chr3 11326994 11331047 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00715 29 560 Receptor kinase-like Gene Family AT4G05200 48.257 5.88e-165 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo3g00715 Pkinase 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00715 - - ccaj:109813299 689.878