Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00712 ATGGCCGTGTTTTCATTAAGGTTACTGTTCTTTGTTTGTTGTCTTCTTCTCATAATAACAATTTTTATATCTCAAGTTAGTGCCGCTAACAATACAGAAAACTACCACTACTTCTGTGATCATGATAACGATAGAGGAAATTACACAGCCAACAGCACCTATGACACCAACCTCAACACCCTTCTATCCACTCTCATTTCCAATACAGAAATTGAGTACGGTTTCTACAATTTCACAAACGGCGAAAACACTGACAAAGTGTACGCCATTGGGCTGTGCAGAGGAGATGTTAAACCAGATGAATGCCGCAGTTGCCTCAACGGTTCCAGAGCCAATCTCACTCAGCTTTGTCCAAATAGGAAGGAAGCAATTGGGTGGTACGAGGATGAGAAATGCATGTTGCGCTACTCAGACCGCTCAATATTCGGCAGCAAAGAAACTGGACCTGCCTATTATGCTCACAACATGGAAAATGCAACGGACTTGGGTCAGTTCAGTAAAGATGTCAACACCTTGCTGGGTAACTTAAGCAGCAAAGCCGCATCAGGTGACTCTCGTGTTAAGTATGATGTAGGAACTATATCTGGTCCTGATAATAAGGTCATATATGGTCTTGTTCAGTGCACACCGGACTTGTTAGGGTCAGAGTGTGCTGATTGCTTGGCTCAGTCCATCGAACGTATCCCAATAGATTGTTGTAAAGACAGCAAAGGTGGTAGGGTTGTTAGACCCAGTTGTAATATGAGGTTCGAAACCTCCTTTCTCTTCTATGGACTTACAGCATATGTTCCGCCAACTCCTCCATCCTCCACCACCACTAACACTTCCTCAGAAGGAAAAAGCAACACAACTACCATCGCCATAGCAATAGCAGTACCAGTTGTAGCTGTTGCTCTGGTGCTCATTTTTTTCTTCATCTGTATAAGAGTGAGGAAGCCAGGGGAAAAGTTTAAATCTCAACAAGAAGCACATGATGATGATGATGATGAAATTGACATTTCTGAGTCATTGCAATTCAGCTTTAACACCATACGAGATGCTACAAATGACTTTTCTGATTCCAATAAACTCGGACAAGGCGGATTTGGGGCTGTTTACAAGGGTAGGCTTATCAATGGACAAGAGATTGCAGTCAAAAGGTTGTCAAGAGATTCGGGTCAAGGAGAGAGGGAATTTAAGAATGAAGTGCTTTTAGTGGCCAAGCTTCAGCACAGAAATTTAGTTAGGCTACTTGGTTTCTGCTTGGAAGGAAGAGAAAGGCTACTTGTCTACGAATTTGTTCCTAATAAAAGCCTTGATTACTTCATATTTGATCAAACCAAGAGAGCACAATTAGATTGGGAAAAGCGCTACAAAATCATTGCAGGTACTGCTCGAGGTATTCTCTACCTCCATCAGGATTCTCGATTGCGCATTATCCATCGTGATCTCAAAGCAAGTAACATTCTCTTAGATGAAGATATGAATCCTAAGATAGCAGATTTTGGCTTGGCAAGATTGTTTGTTGTGGACCAAACTCATGCAGATACAAATAGAGTTGTTGGAACCTATGGATATATGGCACCTGAGTATGCAATGCATGGGCAGTTTTCAGAGAAGTCAGATGTTTTTAGTTTTGGTGTATTGGTTCTTGAGATTGTAAGTGGCCAGAGAAATAGTGGCATTCGTCGTGGAGAGAATATAGATGATCTTCTGAGTTTTGCATGGCGAAGCTGGAGGGAAGGAAGAGCTACAGATATCATAGATCCCACATTAAACAATGGTTCACGAAATGAAATAATGAGATGCATCCACATTGGGTTACTCTGTGTTCAAGACAATGTAGCTGCCAGACCCACCATGGCTTCCATTGTACTCGTGCTTTATAGCCATTCTCTCACTCTCCCACTACCTCTGGAACCTGCATTTTATGTGGATAGTAGAACTGGAAACCTTCCAAACATGCAGTCATGGGAGTTTAATTCAGAAACAACAAGATCAAACGAATACACAACTAGATCAGCTCAAGAATCGATTAATGAGGCTTCAATTACTGAACCATATCCTCGTTAG 2052 0.4181 MAVFSLRLLFFVCCLLLIITIFISQVSAANNTENYHYFCDHDNDRGNYTANSTYDTNLNTLLSTLISNTEIEYGFYNFTNGENTDKVYAIGLCRGDVKPDECRSCLNGSRANLTQLCPNRKEAIGWYEDEKCMLRYSDRSIFGSKETGPAYYAHNMENATDLGQFSKDVNTLLGNLSSKAASGDSRVKYDVGTISGPDNKVIYGLVQCTPDLLGSECADCLAQSIERIPIDCCKDSKGGRVVRPSCNMRFETSFLFYGLTAYVPPTPPSSTTTNTSSEGKSNTTTIAIAIAVPVVAVALVLIFFFICIRVRKPGEKFKSQQEAHDDDDDEIDISESLQFSFNTIRDATNDFSDSNKLGQGGFGAVYKGRLINGQEIAVKRLSRDSGQGEREFKNEVLLVAKLQHRNLVRLLGFCLEGRERLLVYEFVPNKSLDYFIFDQTKRAQLDWEKRYKIIAGTARGILYLHQDSRLRIIHRDLKASNILLDEDMNPKIADFGLARLFVVDQTHADTNRVVGTYGYMAPEYAMHGQFSEKSDVFSFGVLVLEIVSGQRNSGIRRGENIDDLLSFAWRSWREGRATDIIDPTLNNGSRNEIMRCIHIGLLCVQDNVAARPTMASIVLVLYSHSLTLPLPLEPAFYVDSRTGNLPNMQSWEFNSETTRSNEYTTRSAQESINEASITEPYPR 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00712 683 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 32 141 - -
Pumo3g00712 683 MobiDBLite consensus disorder prediction 652 683 - -
Pumo3g00712 683 ProSiteProfiles Protein kinase domain profile. 351 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00712 683 ProSiteProfiles Gnk2-homologous domain profile. 147 255 IPR002902 -
Pumo3g00712 683 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524
Pumo3g00712 683 Gene3D Transferase(Phosphotransferase) domain 1 427 627 - -
Pumo3g00712 683 Pfam Salt stress response/antifungal 39 138 IPR002902 -
Pumo3g00712 683 Pfam Salt stress response/antifungal 157 252 IPR002902 -
Pumo3g00712 683 MobiDBLite consensus disorder prediction 652 676 - -
Pumo3g00712 683 SMART serkin_6 351 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00712 683 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 40 681 - -
Pumo3g00712 683 FunFam cysteine-rich receptor-like protein kinase 10 427 628 - -
Pumo3g00712 683 ProSiteProfiles Gnk2-homologous domain profile. 36 141 IPR002902 -
Pumo3g00712 683 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Pumo3g00712 683 Gene3D Phosphorylase Kinase; domain 1 313 426 - -
Pumo3g00712 683 FunFam Cysteine-rich receptor-like protein kinase 10 149 254 - -
Pumo3g00712 683 SUPERFAMILY Protein kinase-like (PK-like) 333 622 IPR011009 -
Pumo3g00712 683 CDD STKc_IRAK 357 621 - -
Pumo3g00712 683 Gene3D - 149 254 IPR038408 -
Pumo3g00712 683 Gene3D - 35 140 IPR038408 -
Pumo3g00712 683 FunFam Cysteine-rich receptor-like protein kinase 17 318 426 - -
Pumo3g00712 683 Pfam Protein tyrosine and serine/threonine kinase 354 618 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00712 Pumo-Chr3 10527022 10530528 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00712 6 683 Receptor kinase-like Gene Family AT4G21410 49.429 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pumo3g00712 PK_Tyr_Ser-Thr 1.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00712 - - gmx:113000774 962.985