Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00691 ATGGTTGGTGTTGGATGGAGAGGGGCAGAGAAAGGTAATGGAGGGCGTGAGAGAGCCATGCTCATCAACTTGGAACACATCAAGGCTATTATCACTGCTCAAGAAGTTCTCTTGCTCAATTCCACTGACCCCTCTGTTGTCCCTTTTCTTGAAGTTCTTCACCAACGGATTCTGAGTCACCACCAGGAGGATCAAGATGGGAAGGATGGAGATGAAACAAAGCAAGATGGCATGAAGATTCTTCCATTTGAGTTTGTAACACTAGAGGCATGCCTTGAGGCTGCTTGTAGTGCCTTAGAAAATGAGGCACAAATATTGGAACAACAGACTTATCCCGCCTTAGATAAACTGACCTCACAGATTAGTACTCTCAATTTGGAACGCATTCGTCATGTTAAGAGTCGCTTGGTTGACCTAGCTGCTCGTGTTCGAAGGGTAAGGGATGAATTAGAGCACTTGCTAGATGACAATGAAGACATGGCTGAACTGTATTTGACAAAAAAGATTCCTCCTGAAATACCATTTGAACGTGGTGAAGATTCTGCTAGGGATCATGAAGATGAGCAAAATGCTGCTGATTACTCGAGAGATCAAATGTTTGGAGCATCTAATGGAGTTGGTGGTGAAATCCATGAAACCCAAGGTGGCACTACCAACAGTGCTGTAACCAAGCACACTTATGATGTGGAGGAGCTTGAGTTGCTCTTAGGAGCATACTTTGTGCAAATTGGTGGCACATTGAACAAACTATCTAGATCCACATGTCTTGTTCTGCCTCATCTCATTATCCATTCGGGATTACACTTGGTTGTTGCTAAACAAAGATACATACAAGAGACAGATGAAAAATATCCGATGAGTTCAATTGGGCAAAGCATATTGATGGCACTAACTGTTACTGTAAACAAGTATGCTTCATCTAATTTGCAAGCAGTTCATAGAACGCAAGGAAAAGTAGCAACCACAACCACACCAACAACCTTAAGCACCAATGTGGAACTGGGAAGAAGAGGACTTGTCTTATCCACTGTAATCGCCACCACCCAAGTACCTGACTCTAGGACTCAGCTTCTTAAAAAATATCAGAAGAAATCAGAGGAAAACAAGGAGAAAAATGACAAAGAGAGGTTGGAGAGTTATTACAAGCGTAACTACAAGGATTACTTTGAATTGATGGAAGGGACATTGAAGGGAAAGGATGGGAAGCTTTCAGATACAGAAAAGGGTATCCTTGATTGGCTTCAAAAAAACAAGTGA 1257 0.4224 MVGVGWRGAEKGNGGRERAMLINLEHIKAIITAQEVLLLNSTDPSVVPFLEVLHQRILSHHQEDQDGKDGDETKQDGMKILPFEFVTLEACLEAACSALENEAQILEQQTYPALDKLTSQISTLNLERIRHVKSRLVDLAARVRRVRDELEHLLDDNEDMAELYLTKKIPPEIPFERGEDSARDHEDEQNAADYSRDQMFGASNGVGGEIHETQGGTTNSAVTKHTYDVEELELLLGAYFVQIGGTLNKLSRSTCLVLPHLIIHSGLHLVVAKQRYIQETDEKYPMSSIGQSILMALTVTVNKYASSNLQAVHRTQGKVATTTTPTTLSTNVELGRRGLVLSTVIATTQVPDSRTQLLKKYQKKSEENKEKNDKERLESYYKRNYKDYFELMEGTLKGKDGKLSDTEKGILDWLQKNK 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00691 418 Coils Coil 89 109 - -
Pumo3g00691 418 CDD Mrs2_Mfm1p-like 16 252 IPR039204 -
Pumo3g00691 418 Gene3D Magnesium transport protein CorA, transmembrane region 49 286 - -
Pumo3g00691 418 Coils Coil 136 163 - -
Pumo3g00691 418 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 15 252 IPR039204 -
Pumo3g00691 418 Coils Coil 354 378 - -
Pumo3g00691 418 MobiDBLite consensus disorder prediction 173 198 - -
Pumo3g00691 418 MobiDBLite consensus disorder prediction 173 193 - -
Pumo3g00691 418 Gene3D - 14 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00691 Pumo-Chr3 10301591 10306802 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00691 15 251 MRS2 Gene Family AT3G19640 48.013 8.15e-74 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00691 - - ccaj:109817554 278.485