Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00659 ATGCGGCGTTTGTGCTACGGCCCTCTCGATTGCTGCTTCCGACGCAGTGGTGGCCGCGCCGCCGACGGACTTCTCTGGCACACCGACTTGAAGCCCCACGCCTCCGGCGACTTCTCCATCGCCGTCGCTCAGGCCAATTACAGTCTCGAGGATCAGAGCCAAGTCTTCACCTCCCCCTCCGCCACCTACGTCGGCGTCTACGACGGCCACGGCGGCCCCGAAGCTTCTCGATTCGTCAACAAACGCCTCTTCCCTTATTTGCACAAATTTGCCACTGAGAATGGGGGGTTGTCAGTGGAGGTGATTAAAAAGGCGTTCAGTGCCACAGAAGAGGAATTCTTGCACTTGGTGAAGCTATCCTTGCCCATCAGTCCTCAGATTGCTTCCGTGGGATCATGTTGTCTTTTTGGTGCAATTACTCATAATGTGTTGTATGTTGCCAACCTCGGAGACTCGAGAGCTGTTCTTGGCAGGAGGGATACTGAGAGAAAGAACAGTCCAGTCGTGGCAGAGCGCCTGTCAACCGATCATAATGTAGCTGATGAGGAGGTGAGAAAAGAAGTTGAAGCTCTCCACCCCGATGACTCACACGTTGTGGTTTATAGCCGTGGAGTTTGGAGGATTAAGGGCATTATACAGGTGTCAAGATCTATTGGTGATGTGTATTTGAAGAAACCTGATTTCTACCGAGACCCGGTTTTTCAGCAGTTTGGAAATCCTATTCCTTTGAAGCGTCCTGTAATGACAGCTGAACCATCAGTCATTATTAGGGAGATTGAGTCAGAGGATTTATTCTTGATATTTGCATCAGATGGCCTCTGGGAGCAATTAAGTGATGAAGCAGCAGTTCAGATAGTTTTCAAATATCCAAGAGCTGGCATTGCCAAGAGACTGGTGAGAGCTGCTCTTCAGGAAGCTGCCAAGAAGCGAGAGATGAGATATGATGACATAAAGAAAATTGACAGAGGAATAAGACGACACTTCCATGATGATATCACTGTGATTGTAATCTATCTTGATCATCACGCGGGCTCCTCTAATGGTAGATTTAAGCAAACTGCTGTTGGCTATACAACTGCCCCTGTTGATATTTTTTCCCTAAATGCGGATGAAGCTGAAAAGAGTATGCCTAAAGAGTGA 1140 0.4842 MRRLCYGPLDCCFRRSGGRAADGLLWHTDLKPHASGDFSIAVAQANYSLEDQSQVFTSPSATYVGVYDGHGGPEASRFVNKRLFPYLHKFATENGGLSVEVIKKAFSATEEEFLHLVKLSLPISPQIASVGSCCLFGAITHNVLYVANLGDSRAVLGRRDTERKNSPVVAERLSTDHNVADEEVRKEVEALHPDDSHVVVYSRGVWRIKGIIQVSRSIGDVYLKKPDFYRDPVFQQFGNPIPLKRPVMTAEPSVIIREIESEDLFLIFASDGLWEQLSDEAAVQIVFKYPRAGIAKRLVRAALQEAAKKREMRYDDIKKIDRGIRRHFHDDITVIVIYLDHHAGSSNGRFKQTAVGYTTAPVDIFSLNADEAEKSMPKE 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00659 379 Gene3D - 28 348 IPR036457 -
Pumo3g00659 379 SUPERFAMILY PP2C-like 46 341 IPR036457 -
Pumo3g00659 379 ProSitePatterns PPM-type phosphatase domain signature. 63 71 IPR000222 GO:0043169
Pumo3g00659 379 ProSiteProfiles PPM-type phosphatase domain profile. 37 339 IPR001932 -
Pumo3g00659 379 SMART PP2C_4 31 337 IPR001932 -
Pumo3g00659 379 CDD PP2Cc 50 339 IPR001932 -
Pumo3g00659 379 PANTHER PROTEIN PHOSPHATASE 36 338 IPR015655 GO:0004722|GO:0006470
Pumo3g00659 379 Pfam Protein phosphatase 2C 58 308 IPR001932 -
Pumo3g00659 379 FunFam Probable protein phosphatase 2C 42 28 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00659 Pumo-Chr3 9882150 9885492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00659 22 346 PP2C-type Phosphatase Gene Family AT3G51370 57.357 3.72e-140 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00659 - K01102 gmx:100812137 707.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00659 3 9882150 9885492 Pumo3g00659 3 9882150 9885492 ECH
Pumo8g02003 8 56822379 56826554 Pumo3g00659 3 9882150 9885492 PCT