Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00645 ATGGAGGCCAAGGAGGAATATGAAGTGGACCATCTGACCACACCCACAGGGACCAGTTTCTCTCAGTTACTATTCGGAGATGACGATGATGATGATGAAAGTGCATTGGGTCTCGCTGTGGACCAGTCTTCTTACAATTGCAACCTTACCCGTTCACCTCTTTTCTCCACTCACAAGGCACCCCAAATGCTTTGTTTTGGCAACCATCAAAACGAAGGTGACGTCGTTTTGCTTCCTGAAACCAACGTAACCCCTCAGAAATCTGTCATCACTTCTAGTGACTCCTCTTCCGCTTCCTCCTGCAACTACAGCAACACCGGCTTCAATTCCTTACCTAAGTCTAATAAAAAGCGAAATGGGATGGGACAAGAAGCAGTGACCAAGGTTGGTGTTGGAGGCCAGAGACAACCTAAGAAGACCAAAGCAGAGAACCCCACCTCAACCGGACATGCAAAGAGGAAGGAGAAGCTAGGGGAACGAATTGCAGCGTTACAACAGCTTGTTTCTCCCTTTGGCAAGACAGATACAGCATCAGTGCTTCACGAGGCCATGGGTTATATAAGATTTCTTCATGACCAAGTTCAGGTCCTCTGCTCTCCTTACTTGCAAAGTTTGCCTTCCTCACACCATCAAAATCAGCACGGGGACGGAGGTAACAATGAAGAGGAAATGAACAAGGACTTGAGGAGTAGGGGTCTTTGCTTGATCCCTGTGGGATGCACCGTACACGTGGCAGGTAGCAATGGTGCTGATTTTTGGTCACCTGGTGCAATAGGGAACAATGTTTCACCATCAGCAAAAGCAGTGAAACGAAACCAAGATCAATGA 828 0.4758 MEAKEEYEVDHLTTPTGTSFSQLLFGDDDDDDESALGLAVDQSSYNCNLTRSPLFSTHKAPQMLCFGNHQNEGDVVLLPETNVTPQKSVITSSDSSSASSCNYSNTGFNSLPKSNKKRNGMGQEAVTKVGVGGQRQPKKTKAENPTSTGHAKRKEKLGERIAALQQLVSPFGKTDTASVLHEAMGYIRFLHDQVQVLCSPYLQSLPSSHHQNQHGDGGNNEEEMNKDLRSRGLCLIPVGCTVHVAGSNGADFWSPGAIGNNVSPSAKAVKRNQDQ 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00645 275 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 49 243 - -
Pumo3g00645 275 MobiDBLite consensus disorder prediction 127 155 - -
Pumo3g00645 275 MobiDBLite consensus disorder prediction 206 225 - -
Pumo3g00645 275 Gene3D - 148 213 IPR036638 GO:0046983
Pumo3g00645 275 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 141 190 IPR011598 GO:0046983
Pumo3g00645 275 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 152 202 IPR036638 GO:0046983
Pumo3g00645 275 CDD bHLH_AtbHLH_like 152 197 IPR045239 -
Pumo3g00645 275 FunFam Transcription factor bHLH113 134 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00645 Pumo-Chr3 9710957 9712833 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00645 152 255 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31730 57.143 5.61e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00645 - - gmx:100809107 429.098
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00645 3 9710957 9712833 Pumo3g00645 3 9710957 9712833 ECH