Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00639 ATGCAGAGGTTGTTGTCCTTGTCCAACCTGGGAATTACTGTCTCCATACTCACTCTTGTTCAGAGCTTCCACTTCGACCACCCAAAACAACAACATGGTTTGTGTCAAGACCTCATTATCCCCTCCGGTTACCCCTACTCCCAATATACGATTCAAACCAAGGATGGTTTCTTGTTAGGTCTTCAGCGCGTCTCATCTTCTTCTTCTTCTCTTGGGCTTGGCCCGTACGATGGAGAACGAGGCCCTCCGGTTCTGCTTCTGCATGGGTTATTCATGGCAGGTGATGCGTGGTTTCTAAATACTCCAGACCAATCACTTGGTTTCATACTTGCGGATCATGGTTTTGATGTTTGGGTAGGAAATGTGCGTGAAACACGCTGGAGCAATGGGCATTTTTGGGATTGGAGTTGGCAGGATTTAGCCATGTATGATCTTGCAGAAATGATCAATTACATTAATTCAGTAACTAACGCAAAGCTAATTGTACTCGGGCATTCGCAGGGTAAAAAGTCTTTCGCTGCCTTCACTCAACCGGAGATAGCAGAAAAGGTTGAAGCTGCAGCTCTTGTACTTGCCAAGGGCGTTCAACAACTGAACCACAAAAGAACCAGATTCAGAGGTACCACTCCCACGTTGCTCCCTCACAATGTATTCGCACGTGCTCAAGATAAGGCCAGAGGTCCTACATCTTCTTCGTTTCAGCCTCAACAAAGCTCACGGCAACAGTTTCAGGATGTTGCTATGGCATTGCTATTTCTAATAGGATATGCAGTCATCATATTTGAAGAATATCTAGGCATCAATAAAAGCGGAGTGGGACTGTTGATGGCTGTAATCTTATGGGTGATACGGAGTATTGGGGCTCCATCAACTGATACAGCTGTTTCAGAGCTAAAACATGCATCTGCGGAAGTCAGTGAAATAGTGTTTTTCTTGTTTGGTGCAATGACCATTGTTGAGATAGTTGACGCTCATCAAGGATTTAAGCTGGTTACTGACAATATAACAACCCAAAACCCACGCCTTCTCCTATGGGTGATTGGATTTGTTACATTCTTTCTCAGCTCAGTTCTAGACAGCCTGGCATCCACCATAGTCATGATTTCTCTGTTGCGGAAATTAGTACCTCTGTCAGAGTATCGGAAGATATTGGGAGCTGTTGTTGTAATAGCAGCAAATGCTGGTGGTGCATGGAGTCCTATCGGTGCTGTTACCACTACTATGCTGTGGATACATGGCCAAATATCTGCAGTGCAAACAATGAAGGGTTTGTTTGTACCTTCAGTCATTTCTCTGGTTGTTCCTCTGGTTCTGATGTCCTACACTAGTGGAGTTAATGGGAAGGGACAAAATTCTCCCGATGTCTTTGCCTCTGAACAGATTGCTCCTCGAGGGCTGCTTGTTTTCTCAGTGAGTTTAGGAGCTTTGATTTTTGTCCCAGTGTTCAGGTCCGTCACAGGTTTACCTCCGTACATCGGAATGCTGCTCGGACTTGGCATGCTTTGGATCCTCACTGATGCTATCCATTATGGTGAATCTGAAAGGCAGAACCTAAAAGTGTCACATGCTCTGTCAAGGATAGACACTCAAGGAGCACTATTTTTCTTGGGAATTCTATTATCCATTAGCAGCCTGGAGGCAGCAGGGATTCTTCGGGAAATAGCAAATTACTTTGATGCACATGTCCCAAGTAGTGAACTGATTGCAAGTGCTATTGGACTCATATCTGCAATAATAGACAATGTCCCATTGGTTGCTGCCACAATGGGAATGTATGATGTCTCTTCTTTCCCTCAAGATTCTGAGTTCTGGCAATTGATTGCATTATGTGCTAGTACAGGCGGATCCATATTAATTACTGGCTCAGCTGCTGGAGTTGCGTTCATGGGGATGGAAAGGGTGGGATTCTTTTGGTACTTACGGAAGGTTAGTGGCTTTGCCTTAGCAGGTTATGCTGCTGGTATTGCTGCCTATTTAGCGCTTCATAATCTCAGCATCTTCCAACCAACTCTAGCGGAGGTTCCTTTCCTTTCTGGTTCATAA 2043 0.4484 MQRLLSLSNLGITVSILTLVQSFHFDHPKQQHGLCQDLIIPSGYPYSQYTIQTKDGFLLGLQRVSSSSSSLGLGPYDGERGPPVLLLHGLFMAGDAWFLNTPDQSLGFILADHGFDVWVGNVRETRWSNGHFWDWSWQDLAMYDLAEMINYINSVTNAKLIVLGHSQGKKSFAAFTQPEIAEKVEAAALVLAKGVQQLNHKRTRFRGTTPTLLPHNVFARAQDKARGPTSSSFQPQQSSRQQFQDVAMALLFLIGYAVIIFEEYLGINKSGVGLLMAVILWVIRSIGAPSTDTAVSELKHASAEVSEIVFFLFGAMTIVEIVDAHQGFKLVTDNITTQNPRLLLWVIGFVTFFLSSVLDSLASTIVMISLLRKLVPLSEYRKILGAVVVIAANAGGAWSPIGAVTTTMLWIHGQISAVQTMKGLFVPSVISLVVPLVLMSYTSGVNGKGQNSPDVFASEQIAPRGLLVFSVSLGALIFVPVFRSVTGLPPYIGMLLGLGMLWILTDAIHYGESERQNLKVSHALSRIDTQGALFFLGILLSISSLEAAGILREIANYFDAHVPSSELIASAIGLISAIIDNVPLVAATMGMYDVSSFPQDSEFWQLIALCASTGGSILITGSAAGVAFMGMERVGFFWYLRKVSGFALAGYAAGIAAYLALHNLSIFQPTLAEVPFLSGS 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00639 680 Pfam Partial alpha/beta-hydrolase lipase region 36 101 IPR006693 GO:0006629
Pumo3g00639 680 SUPERFAMILY alpha/beta-Hydrolases 37 168 IPR029058 -
Pumo3g00639 680 Gene3D alpha/beta hydrolase 24 256 IPR029058 -
Pumo3g00639 680 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 212 680 IPR045016 GO:0006814|GO:0015297
Pumo3g00639 680 Pfam Citrate transporter 256 611 IPR004680 GO:0016020|GO:0055085
Pumo3g00639 680 NCBIfam sodium:proton antiporter NhaD 272 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00639 Pumo-Chr3 9660515 9672302 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00639 244 680 Antiporters AT3G19490 79.680 0.0 678
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00639 - - gsj:114401198 972.23