Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00636 ATGGGAATCATGAGCCTTAACTCTCAGAATCTCCATTTGTGGTGGAGACTCTCATCCTTCCTTCTTCTACTTCTTCAATCTGTCACATCTCAAATTGTTACACCTCTTAACTCTGATGGGATTCACTTGCTTAAATTCAAATACTCCATCCTCAGCGACCCATTATCAGTCTTAGAGAGCTGGAACTACGATGATGTAACACCATGTTCATGGCATGGTGTTACATGCAGTGAAATTGGAGCCCCTGGTACCCCTGACTTTTTCAGAGTAACTAGCTTGGCCCTTCCCAATAGCCAACTTTTAGGTTCCATTTCTGAAGACTTAGGCTTCATCCAATTCCTTCGCCACATCGATCTCTCCAACAACTTCCTCAATGGCTCTCTACCCAACACTATCTTCAACTCTTCTCAACTTCAAGTACTTTCCCTCTCAAACAATGTTATCTCAGGTGAACTACCTGAGCTAATTGGTAAAATGACAAACCTTAAAGTTCTCAACGTCTCTGACAATGCCTTTGCCGGGTTGATCCCAGAAAACCTTCCCACTCTACCAAACTTAACCGTTGTTTCTTTGAAGAGTAACTACTTTTCTGGTAGTGTCCCAACCGGGTTCAACTATGTGGAGATTCTGGATCTGTCCTCCAATTTGCTCAACGGTTCTTTGCCGAATGACTTTGGCGGCGAAAGCTTGCGCTACTTGAACCTCTCTTACAACAAGATTTCGGGAACAATACCACCAGCATTCGCGAAACAGATTCCTGGAAACACAACAGTGGACCTCTCATTCAACAATCTGACAGGGCAAATACCAGGGTCTGAGGCTTTGCTCAACCAGAAGACAGAGTTTCTATCAGGGAATGCTGATCTTTGTGGTAAGCCTCTGAAGATTCTTTGCACTGTTCCCTCTACGGAGTCCACTGCTCCACCCAATGTCACCACATCTTCACCAGCCATTGCAGCCATACCAAAAACAATTGACTCAACCCCTTCAACAAACTCAACAGGAACCACCACCAGTTCTCAGAGTGTATCACCAAGTGGCCTAAAACCTGCCAGCATAGCAGCAATTGTGGTAGGAGACTTAGCTGGCATGGCCCTTTTGGCCCTCATCATTCTCTTCATCTACCAACAGAGAAAGAAAAGATATCCGAATCCAAAACGAAACACTAATGCCTCTTCTGCTAACAACTCAGAAAAGAAAGAAGAAACTGTTTCAAGACAAGATGCAGAAGCGAGAACTGTAACTCCTTCACTTCCTTGTTCCTGCTTAACAATCAAAGAAGAAGAAACTTCAGAAGCAACGAGCTGTGACAGTGACCGCGAGAGCAACACCGCGGAGGACATCATAGCAGCACAAAACGGGAACCTTCCGAAACACGGCACCCTTGTAACCGTGGACGGGGAAACAAATTTGGAGCTTGAGACTTTGCTTAAGGCTTCAGCGTATATTTTGGGAAACAGCCACGTCAGCATTGTTTACAAGGCGGTGCTCGAGGATGGGAGAGCCTTTGCCGTTAGAAGGATCGGTGAGTGTGGGATTGAGAGAATGAAGGATTTTGAGAACCAAGTGCGTGCCATTGCAAAGCTTCGCCATCCCAATTTGGTTAAGGTTCGTGGCTTCTGCTGGGGTCAAGATGATAAACTCCTAATATGTGACTATGTCCCCAATGGCAGCCTCGCTACCATAGATCACAGAAGAGCAGGTTCGTCCCCTTTGAACTTGTCCTTGGAGGTGCGGTTGAAGATAGCAAAAGGGGTGGCACGAGGGTTGGCGTTCATTCACGAGAAGAAACACGTGCATGGCAACGTTAAACCCAGCAACATCCTGTTAAGCTCAGAAATGGAACCCATAATAAGCGATTTTGGGCTGGACCGGCTCCTCTTAAATGACGTAACCCACAGAGCAAACGGTTCAGCTAGGCAACAATTAATGATGAACCAAAGAAGCCAACAAGACCTTCCATTTGGTTCTAGCCCCTACGCAACAATGGGACCATCCACTAGTGGTGTCGGTCAAATAATGCACTATCAAGCACCAGAGTCACTTCAAAACATCAAGCCCAGCAACAAGTGGGACGTGTACTCTTTTGGCGTGGTCTTGCTGGAGCTTCTAACTGGGAGGGTTTTCTCGGACCGGGAGTTGGACCAGTGGCATGAACCCGGTTCAGTGGAGGAGGAAAATAACCGGGTCTTGAGGATAGCTGACGTGGCACTAAAGTCTGAAATAGAAGGGAGAGAGAATGTGGTATTGGCGTGGTTCAAGTTGGGGCTTAGCTGTGTTTCTCATGTCCCACAAAAGAGACCGTCCATGAAAGAGGCTCTACAAATCTTAGACAAGATCCCTGGTGCTGCTCCAGTCAATTAA 2364 0.4649 MGIMSLNSQNLHLWWRLSSFLLLLLQSVTSQIVTPLNSDGIHLLKFKYSILSDPLSVLESWNYDDVTPCSWHGVTCSEIGAPGTPDFFRVTSLALPNSQLLGSISEDLGFIQFLRHIDLSNNFLNGSLPNTIFNSSQLQVLSLSNNVISGELPELIGKMTNLKVLNVSDNAFAGLIPENLPTLPNLTVVSLKSNYFSGSVPTGFNYVEILDLSSNLLNGSLPNDFGGESLRYLNLSYNKISGTIPPAFAKQIPGNTTVDLSFNNLTGQIPGSEALLNQKTEFLSGNADLCGKPLKILCTVPSTESTAPPNVTTSSPAIAAIPKTIDSTPSTNSTGTTTSSQSVSPSGLKPASIAAIVVGDLAGMALLALIILFIYQQRKKRYPNPKRNTNASSANNSEKKEETVSRQDAEARTVTPSLPCSCLTIKEEETSEATSCDSDRESNTAEDIIAAQNGNLPKHGTLVTVDGETNLELETLLKASAYILGNSHVSIVYKAVLEDGRAFAVRRIGECGIERMKDFENQVRAIAKLRHPNLVKVRGFCWGQDDKLLICDYVPNGSLATIDHRRAGSSPLNLSLEVRLKIAKGVARGLAFIHEKKHVHGNVKPSNILLSSEMEPIISDFGLDRLLLNDVTHRANGSARQQLMMNQRSQQDLPFGSSPYATMGPSTSGVGQIMHYQAPESLQNIKPSNKWDVYSFGVVLLELLTGRVFSDRELDQWHEPGSVEEENNRVLRIADVALKSEIEGRENVVLAWFKLGLSCVSHVPQKRPSMKEALQILDKIPGAAPVN 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00636 787 Gene3D Transferase(Phosphotransferase) domain 1 554 784 - -
Pumo3g00636 787 Pfam Leucine rich repeat N-terminal domain 37 77 IPR013210 -
Pumo3g00636 787 Gene3D Ribonuclease Inhibitor 36 205 IPR032675 -
Pumo3g00636 787 CDD TM_EGFR-like 352 381 - -
Pumo3g00636 787 Pfam Leucine Rich Repeat 229 249 IPR001611 GO:0005515
Pumo3g00636 787 Pfam Leucine Rich Repeat 114 132 IPR001611 GO:0005515
Pumo3g00636 787 Gene3D Ribonuclease Inhibitor 206 300 IPR032675 -
Pumo3g00636 787 MobiDBLite consensus disorder prediction 305 347 - -
Pumo3g00636 787 MobiDBLite consensus disorder prediction 382 412 - -
Pumo3g00636 787 CDD STKc_IRAK 484 780 - -
Pumo3g00636 787 FunFam Leucine-rich repeat receptor-like protein kinase 206 300 - -
Pumo3g00636 787 Pfam Protein kinase domain 483 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00636 787 SUPERFAMILY L domain-like 40 296 - -
Pumo3g00636 787 FunFam Leucine-rich repeat receptor-like protein kinase 36 202 - -
Pumo3g00636 787 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 207 781 IPR046959 -
Pumo3g00636 787 Gene3D Phosphorylase Kinase; domain 1 459 553 - -
Pumo3g00636 787 ProSiteProfiles Protein kinase domain profile. 478 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pumo3g00636 787 SUPERFAMILY Protein kinase-like (PK-like) 483 779 IPR011009 -
Pumo3g00636 787 Pfam Leucine Rich repeats (2 copies) 137 173 IPR025875 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00636 Pumo-Chr3 9634459 9637997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00636 17 780 Receptor kinase-like Gene Family AT4G37250 50.513 0.0 685
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pumo3g00636 Pkinase 1.3e-31 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00636 - - gmx:102667237 1350.88