Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00629 ATGCCGACTGCTGAGTTGTTAGCTACGGCACCTTTATATAAAAAAATAATAATGGGTAGCCTTGAAGAGGAAAGAACAACAGTAGGTTGGGCAGCAAGAGACCCTTCAGGGATTCTCTCCCCATACACCTACAATCTAAGAAACACAGGCCCTGATGATGTTTACATCAAAGTTCACTACTGTGGAATTTGCCATTCAGATCTTCACCAGATTAAAAATGAACTTGGCATGTCCAACTATCCCATGGTCCCAGGACATGAAGTAGTTGGTGAGGTACTGGAGGTGGGATCAAGCGTTAGCAGGTTCAGAGTGGGAGAATTGGTGGGAGTTGGACTCCTCGTAGGTTGCTGCAAAAACTGCCAGCCATGCCAACGAGACATTGAAAATTACTGCAGCAAGAAGATCTGGTCTTACAATGATGTTTATGTCGATGGAAAACCCACACAGGGTGGCTTTGCTGAAACCATGATCGTTGAGCAAAAGTTTGTGGTGAAAATTCCAGAGGGTTTGGCGCCAGAGCAAGTGGCACCATTATTGTGTGCGGGTGTGACAGTGTACAGTCCACTGGCACACTTTGGGCTAAAAGAGAGTGGACTGAGGGGTGGAATATTGGGGCTTGGAGGAGTAGGACACATGGGGGTGAATATAGCAAAGGCACTGGGTCACCATGTGACTGTGATAAGCTCTTCTGACAAGAAGAAACAAGAGGCCCTTGAACACCTTGGAGCTGACCAATACCTTGTTAGCTCTGATGCCACTGCCATGCAGGAAGCTGCTGATTCACTTGACTACATCATTGACACTGTGCCTGTTGGTCACCCTCTTGAGCCTTATCTCTCCTTGCTCAAACTTGATGGCAAGTTGATCTTGATGGGGGTCATCAACACCCCTCTGCAATTTGTTAGCCCCATGGTCATGCTAGGGAGGAAGTCAATAACGGGAAGCTTCATTGGGAGCATGAAGGAGACAGAGGAGATGTTGGAGTTCTGGAAAGAGAAGGGTCTGAGTTCGATGATTGAAGTGGTAAACATGGATTACATTAACAAAGCCTTCGAAAGGTTGGAGAAGAACGATGTGAGATACAGGTTTGTAGTGGATGTCAAAGGCAGCAAACTTGTTGATCAGTAA 1128 0.4645 MPTAELLATAPLYKKIIMGSLEEERTTVGWAARDPSGILSPYTYNLRNTGPDDVYIKVHYCGICHSDLHQIKNELGMSNYPMVPGHEVVGEVLEVGSSVSRFRVGELVGVGLLVGCCKNCQPCQRDIENYCSKKIWSYNDVYVDGKPTQGGFAETMIVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLAHFGLKESGLRGGILGLGGVGHMGVNIAKALGHHVTVISSSDKKKQEALEHLGADQYLVSSDATAMQEAADSLDYIIDTVPVGHPLEPYLSLLKLDGKLILMGVINTPLQFVSPMVMLGRKSITGSFIGSMKETEEMLEFWKEKGLSSMIEVVNMDYINKAFERLEKNDVRYRFVVDVKGSKLVDQ 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00629 375 Gene3D - 181 337 - -
Pumo3g00629 375 Pfam Alcohol dehydrogenase GroES-like domain 51 166 IPR013154 -
Pumo3g00629 375 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 85 99 IPR002328 GO:0008270|GO:0016491
Pumo3g00629 375 Pfam Zinc-binding dehydrogenase 208 329 IPR013149 -
Pumo3g00629 375 Gene3D - 30 367 - -
Pumo3g00629 375 FunFam Putative cinnamyl alcohol dehydrogenase 6 338 367 - -
Pumo3g00629 375 FunFam Cinnamyl alcohol dehydrogenase 181 337 - -
Pumo3g00629 375 SMART PKS_ER_names_mod 37 365 IPR020843 GO:0016491
Pumo3g00629 375 CDD CAD1 28 366 IPR047109 GO:0016616
Pumo3g00629 375 SUPERFAMILY GroES-like 33 198 IPR011032 -
Pumo3g00629 375 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 171 335 IPR036291 -
Pumo3g00629 375 FunFam probable cinnamyl alcohol dehydrogenase 30 187 - -
Pumo3g00629 375 PANTHER ALDEHYDE REDUCTASE 23 369 IPR047109 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00629 Pumo-Chr3 9579968 9581775 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00629 18 375 Monolignol Biosynthesis Gene Families AT3G19450 77.437 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00629 K00083 - gmx:100777558 644.039