Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00620 ATGGCTACGTTTTCAATTGGGACACACTTGTCCTTGTTCCAGCATTTGCGTAATTTTAGGCTTCCACTTCATGGCCTTTGCACCGTTGAATCCTCACCCTTCTTTGGCTCCTCTTCCTGCAGAACCAGATTCAGAGATACCACTCCCACGTTGCTCCGTCACAATGTAATGGCACGTGCTGAAGATAAGGCCAGAGACCCTACTACATCTTCCTTTCAGCCTCAACAAAGTTCACAGCAACAGTTTCAGAATTTGACACCAGAATCTGGAAATTGTGACCCCCTATGTTCACTCGATGAAACAAGTTCACAAGAGTTTGAAGACAGCTACCAGCCCAAGACCGATTTGTTCAAGGCTGTTGCAATACTAGCAGCAGCTGCAACCGGGGCAGTGGCAATTAACCATTCTTGGGTGGCCACTAATCAGGATCTTGCTATGGCATTGCTATTTGTAATAGGATATGCAGGCATCATATTTGAAGAATCTCTAGCCTTCAATAAAAGTGGAGTGGGACTGTTGATGGCTGTAAGCTTATGGGTGATACGGAGTATTGGGGCTCCATCAACTGATATAGCTGTTTCAGAGCTTACACGTGCATCTGCGGAAGTCAGTGAAATAGTGTTTTTCTTGCTTGGTGCAATGACCATTGTTGAAATTGTTGATTCTCATCAAGGATTTAAGCTGGTTACTGACAATATAACAACTCGAAATCCACGCCTTCTCCTCTGGGTGATTGGATTTGTTACATTTTTTCTCAGTTCAGTTCTAGACAACCTGACATCCACCATAATTATGGTTTCTCTGTTGCGGAAATTAGTACCTCCATCAGAGTACCGAAAGATTCTTGGAGCTGTTGTTGTAATAGCAGCAAATGCTGGGGGTGCATGGACTCCTATTGGTGATGTTACAACTACTATGCTGTGGATACATGGGCAAATATCTGCAGTTCAAACAATGAAGGGTTTGTTTGTACCTTCAGCCGTTTCTCTAGCTGTTCCACTGGCTCTAATGTCCCTGACTAGTGAAGTTAATGGGAAGGGACAAAATTCTCCCAATGTCTTGGCATCTGAACAGATAGCTCCTCGAGGACAGCTTGTTTTCTCAGTGGGTTTAGGAGCTTTGATTTTTGCCCCAGTGTTCAATGCCCTCACAGGTTTGCCTCCATATATGGGGATGCTGCTTGGACTTGGCGTGCTTTGGATCCTCACAGATGCTATCCATTATGGTGAATCTGAAAGGCAGAAGCTAAAAGTACCACAGGCTCTCTCAAGGATAGACACTCAAGGAGTGCTATTCTTCCTGGGAATTCTATTATCTGTTAGCAGCCTGGAGGCAGCAGGGATTCTTCGGGAAATAGCAAATTACCTTGATGCACATGTCCCGAGTAGTGAACTGATTGCAAGTACTATTGGACTCATATCTGCAGTAATAGACAATGTTCCATTGGTTGCTGCAACAATGGGAATGTATGATGTCACTTCTTTCCCTCAAGATTCTCAGTTCTGGCAATTGATTGCATTTTGTGCTGGTACTGGTGGATCCATGTTAATTATTGGCTCAGCTGCTGGAGTTGCATTCATGGGGATGGAAAAGGTGGACTTCCTTTGGTACTTACGAAAGATTAGTGGCTTTGCTTTTGCAGGTTATGCTGCTGGTATTGTTGCCTATTTAGCGCTTCATAACCTCAACATCTCCCTACCAACTCTTGCGGAGGTTCCTTTCCTTTCTGGTTCATAA 1737 0.4421 MATFSIGTHLSLFQHLRNFRLPLHGLCTVESSPFFGSSSCRTRFRDTTPTLLRHNVMARAEDKARDPTTSSFQPQQSSQQQFQNLTPESGNCDPLCSLDETSSQEFEDSYQPKTDLFKAVAILAAAATGAVAINHSWVATNQDLAMALLFVIGYAGIIFEESLAFNKSGVGLLMAVSLWVIRSIGAPSTDIAVSELTRASAEVSEIVFFLLGAMTIVEIVDSHQGFKLVTDNITTRNPRLLLWVIGFVTFFLSSVLDNLTSTIIMVSLLRKLVPPSEYRKILGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISAVQTMKGLFVPSAVSLAVPLALMSLTSEVNGKGQNSPNVLASEQIAPRGQLVFSVGLGALIFAPVFNALTGLPPYMGMLLGLGVLWILTDAIHYGESERQKLKVPQALSRIDTQGVLFFLGILLSVSSLEAAGILREIANYLDAHVPSSELIASTIGLISAVIDNVPLVAATMGMYDVTSFPQDSQFWQLIAFCAGTGGSMLIIGSAAGVAFMGMEKVDFLWYLRKISGFAFAGYAAGIVAYLALHNLNISLPTLAEVPFLSGS 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00620 578 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 53 578 IPR045016 GO:0006814|GO:0015297
Pumo3g00620 578 MobiDBLite consensus disorder prediction 62 85 - -
Pumo3g00620 578 Pfam Citrate transporter 155 510 IPR004680 GO:0016020|GO:0055085
Pumo3g00620 578 MobiDBLite consensus disorder prediction 67 85 - -
Pumo3g00620 578 NCBIfam sodium:proton antiporter NhaD 171 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00620 Pumo-Chr3 9446552 9451929 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00620 1 578 Antiporters AT3G19490 74.068 0.0 807
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00620 - - gmx:100779521 1004.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00620 3 9446552 9451929 Pumo3g00620 3 9446552 9451929 ECH