Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00613 ATGAGAGTCTTAACTCCTGCCAGTCCCGCCCCAGTGGAAAGGAGCACCCCTGCACAGAATGCAGACAAAGAATCAGATAGTCATGATAAAGATGATGTGTTTTCAGATGGCGAGGGAGAGCAATCTGCTTCTTCAAGAAGCAAGCAAACAAATGCACCTTCTGAAGCAGCAGTTGAAACAGTTACAAATGACACCAGAGTCTCCGAATCAAACAGAACTTCAAATCATATTGCAAATTTATCACGTGCAACAGAGCAAGTTTCCTTGGGAAACAAGAGCAGCTCTACATCAATTCATCATGCTGGTGAGCCAAGAAGTAATGTTGACGGAAAAACAGTGTCCAGTCTCGAGGTGCCCAGTGCAGAAAGTGAGTTTAAGGCCATGGCTGCAGATGCTTCTGTTTTTACCTTTGGAGATGATGAAGACTACGAAAGTGATTGA 441 0.4422 MRVLTPASPAPVERSTPAQNADKESDSHDKDDVFSDGEGEQSASSRSKQTNAPSEAAVETVTNDTRVSESNRTSNHIANLSRATEQVSLGNKSSSTSIHHAGEPRSNVDGKTVSSLEVPSAESEFKAMAADASVFTFGDDEDYESD 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00613 146 MobiDBLite consensus disorder prediction 1 114 - -
Pumo3g00613 146 MobiDBLite consensus disorder prediction 19 37 - -
Pumo3g00613 146 MobiDBLite consensus disorder prediction 38 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00613 Pumo-Chr3 9227629 9231588 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00613 7 146 Protein tyrosine phosphatase (PTP) family AT3G19420 38.621 3.53e-19 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00613 K01110 - gmx:100799214 234.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pumo3g00613 3 9227629 9231588 Pumo3g00613 3 9227629 9231588 ECH
Pumo8g01983 8 56454430 56462795 Pumo3g00613 3 9227629 9231588 PCT