Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00611 ATGTGCAGCTTCAACCAGAAAGACATTGTAGGGCCTGGGCCACCTAATGATAAGATTTCCAATTTCTACATAAGTTGCCATTGTTACTTTTTTAATCAAATGGATTCAGTGCCTGCTGATGTGTCTAATTCACATCCTAGCCATGATCCGTCGAATTCACCTCCTGCTAAAGAGACTGATGGACAAGCTTCTGCTGCTGTAGTCTCCGGGCAAGATAATTCTCCACATGAGGCATCATCTAGGCTATCTCCCACTGGCATATCATCCTGGGCCAAATTGAAAATTTCTCAGCCATTTTCTGGCTCCCAAGATGACTCATCAAGTGGAAATGTTGGGAAATCAGCTTTTTCTCGCATTACTAGTAATTTGGGATTGAGGTTGTCTCCAAAGTCTCCTGTAGCAGATGACAGTTCCAATGAAACAGCTGTACAGTCTAACTTGTTTGGAACTATTACGAAAGGCCTGGTTGACTCTTCTAAGAATGCAGTGAAAGCTGTGCAGGTTAAGGCACGCCATGTTGTTTCACAGAATAAACGCAGATACCAGGAAGGAGGTTTTGATTTAGATATGACATATATCACTGAAAACGTTATTGCAATGGGATTCCCTGCTGGTGACATGAGCTCTGGGTTTTTCGGCTATTTTGAAGGATTTTACAGAAATCATATGGAAGAAGTGATTAAGTTTTTTGAAACTCACCATAAGGGTAAATACAAAGTTTATAATCTTTGTTCTGAGAGGTTGTATGATGCATCATTGTTTGAGGGGAAGGTGGCTAGCTTCCCATTTGATGACCACAATTGCCCACCAATTCAACTGATTATATCATTCTGTCAAAGTGCTTACTCATGGTTGAAAGAAGACATTGAGAATGTTGTGGTTGTCCATTGTAAGGCTGGAATGGCAAGGACAGGGTTGATGATTTCTAGTCTTCTATTATTCTTAAAGTTCTTCCCAACTGCTGAGGAATCGATGGATTACTATAATCAGAAAAGATGTGTTGATGGAAAGGGACTTGTTCTGCCTAGTCAGATTAGGTATGTCAAATATTTTGAACGAGCCTTGACTTACTTTAATGGTGAAAACCCACCTGCCCGCAGGTGCATGCTTAGGGGATTCCGGCTTCACAGATGCCCTTACTGGATTAGGCCCTCTATAACTGTCTCAGATCATAGTGGTGTGTTGTTCTCAACCAAAAAGCATCCAAGAACCAAGGATCTTTTGCCAGAAGATTTTTGGTTTAGTGCGCCAAAGAAGGGAGTGATGGTCTTTGCTTTGCCAGGAGAGCCTGGTCTTACAGAGTTGGCTGGGGACTTCAAAATCCATTTTCATGATCGCCAAGGAGATTTTTACTGTTGGTTGAACACAACTATGACAGAAAATAGGAAAGTATTGAACACCAGTGATCTCGATGGCTTTGACAAGAGAAAATTGCCTTCTCCGGGATTTATGGTGGAGGTTGTGCTCGTAGATTATAATGGCAATGTTGTAACTTCCAAACCTGAAACTACTACAAAGAAATCAGATGAGAGTTCAAGTAACAGTCCTGCCCGTCCCGCCCCAGTGGAAAGGAGCTCCCCCGCACAGAATGCAGACAAAGAATCGGATAGTCATGATAAAGATGATGTTTTTTCAGATGGCGAGGGAGAGCATTCTGCTTCTTCAAGAAGCAAGCAAACAAATGCACCTTCTGAAGCAGCAGTTGAAACAGTTACAAATGACACCAGAGTCTCCGAATCAAACAGAACTTCAAATCAAATTGCAAATTTATCACATGCAACAGAGCAAGTTTCCTTGGGAAACAAGAGCAGCTCTACGCCAATTCATCATGCTAGTGAGCCAAGAAGTAATGTTGACGGAAAAACAGTGTCCAGTCTCGAGGTGCCCAGTGCAGAAAGTGAGTTTAAGGCCATGGCTGCAGATGCTTCTGTTTTTACCTTTGGAGATGATGAAGACTACGAAAGTGATTGA 1971 0.4216 MCSFNQKDIVGPGPPNDKISNFYISCHCYFFNQMDSVPADVSNSHPSHDPSNSPPAKETDGQASAAVVSGQDNSPHEASSRLSPTGISSWAKLKISQPFSGSQDDSSSGNVGKSAFSRITSNLGLRLSPKSPVADDSSNETAVQSNLFGTITKGLVDSSKNAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENVIAMGFPAGDMSSGFFGYFEGFYRNHMEEVIKFFETHHKGKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPIQLIISFCQSAYSWLKEDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESMDYYNQKRCVDGKGLVLPSQIRYVKYFERALTYFNGENPPARRCMLRGFRLHRCPYWIRPSITVSDHSGVLFSTKKHPRTKDLLPEDFWFSAPKKGVMVFALPGEPGLTELAGDFKIHFHDRQGDFYCWLNTTMTENRKVLNTSDLDGFDKRKLPSPGFMVEVVLVDYNGNVVTSKPETTTKKSDESSSNSPARPAPVERSSPAQNADKESDSHDKDDVFSDGEGEHSASSRSKQTNAPSEAAVETVTNDTRVSESNRTSNQIANLSHATEQVSLGNKSSSTPIHHASEPRSNVDGKTVSSLEVPSAESEFKAMAADASVFTFGDDEDYESD 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00611 656 ProSiteProfiles Phosphatase tensin-type domain profile. 179 358 IPR029023 -
Pumo3g00611 656 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 164 361 - -
Pumo3g00611 656 MobiDBLite consensus disorder prediction 529 553 - -
Pumo3g00611 656 MobiDBLite consensus disorder prediction 498 622 - -
Pumo3g00611 656 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 192 360 IPR029021 -
Pumo3g00611 656 CDD PTP_PTEN 189 354 IPR045101 GO:0016791
Pumo3g00611 656 ProSitePatterns Tyrosine specific protein phosphatases active site. 295 305 IPR016130 GO:0016311|GO:0016791
Pumo3g00611 656 Gene3D Protein tyrosine phosphatase superfamily 164 361 IPR029021 -
Pumo3g00611 656 MobiDBLite consensus disorder prediction 554 622 - -
Pumo3g00611 656 MobiDBLite consensus disorder prediction 40 84 - -
Pumo3g00611 656 MobiDBLite consensus disorder prediction 498 520 - -
Pumo3g00611 656 ProSiteProfiles C2 tensin-type domain profile. 365 492 IPR014020 -
Pumo3g00611 656 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 272 332 IPR000387 GO:0016311|GO:0016791
Pumo3g00611 656 SMART PTEN_C2_2 363 491 IPR014020 -
Pumo3g00611 656 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 156 621 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00611 Pumo-Chr3 9218254 9224986 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00611 66 656 Protein tyrosine phosphatase (PTP) family AT3G19420 69.333 0.0 858
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00611 K01110 - gmx:100784003 1153.27