Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00600 ATGGCGGGTTTTGGCGGGAAAAAGGTGCACCAAATGATCGTCGGTTTCGGCGGCAGCGGCCTCGGCCAGGTCGTCATCGCCGTTGCCGTCTCCTTCCTCGTCCGCGTCTTCTCCGCTCCTGGCCCCGCCCCCTCGCCGGAGAACGACGCCGACGACGTGCCGGAGAACGATTCCGGCGACGCCGAAGCTCCAACCGTTGGCAAGGTCACGCCGGTCACAATCCGGTGGAGAAACATCAATTGCTCCATTTCCGATAAATCCTCCAAGTCCGTGAGGTTTCTGCTTAAAAATGTGAGTGGAGAAGCTAAGCCTGGAAGGTTATTAGCCATAATGGGACCTTCAGGTTCAGGGAAGACGACGTTGCTTAATGTTCTTGCGGGTCAGCTCACAGCATCTCCTCGGTTGCATTTGAGTGGCGTTTTGGAGTTCAATGGAAAACCTGGTTCCAAGAATACTTACAAGTTTGCTTATGTGCGACAGGAGGATCTCTTTTTCTCGCAACTCACTGTGCGGGAGACATTATCTCTTGCTACTGAACTCCAGCTTCCCAACATATCTTCTGCGGAAGAGAGGGATGAATTTGTGAACAATCTTCTTTTCAAGCTAGGCTTGGTTAGTTGTGCTGATACCAATGTTGGTGATGCAAAAGTTCGTGGAATTAGTGGTGGTGAAAAGAAACGCTTATCATTGGCATGTGAACTGCTTGCAAGCCCATCTGTTATATTTGCTGATGAACCCACAACAGGACTTGATGCCTTCCAGGCTGAGAAAGTCATGGAAACTCTCCAACAACTTGCCCAAGATGGTCATACTGTAATTTGTTCTATACATCAGCCAAGAGGTTCAGTGTATAGTAAATTTGACGACATCATCTTGCTAACAGAGGGTTCACTTGTTTATGCTGGTCCTGCTCGTTATGAACCACTGGCATACTTCTCAAAATTTGGGTACCAATGCCCAGATCATATAAATCCTGCTGAATTTTTGGCTGATCTTATATCCATAGACTACAGTTCTGCTGATAGTGTCTATACCTCTCAAAAAAGGATTGATGGTCTTGTTGAGTCATTCTCACAAAGACAATCTGCAGTTATATATGCAACTCCAATTACTATAAATGATATCTCAAACAGTAGAAAGAAAATCAGCCAGAGGGCTGTAGTAAAGAAGAAAGGAGTTTGGTGGAAGCAATTCTGGTTGCTCCTTAAAAGAGCATGGATGCAGGCTTCCCGTGATGCACCAACAAACAAAGTTCGGGCAAGGATGTCAATTGCGTCGGCAATTATCTTTGGGTCTGTATTTTGGAGAATGGGAAATTCGCAGACTTCAATACAAGACAGAATGGGATTACTTCAGGTTACTGCAATAAACACAGCTATGGCTGCTCTCACAAAGACTGTAGGTGTGTTTCCAAAGGAACGGGCAATTGTAGATAGAGAACGTGCTAAAGGCTCCTATTCCTTGGGTCCCTATCTGTTCTCAAAATTGTTGGCTGAGATTCCCATTGGAGCAGCATTTCCATTAATGTTTGGTGCTGTTTTGTATCCAATGGCACGTCTTCATCCTACTTTTCGAAGATTTGGGAAATTCTGTGGCATTGTCACTATGGAATCTTTTGCTGCATCTGCTATGGGTCTTACTGTTGGTGCCATGGTTCCAACCACTGAAGCAGCAATGGCAGTAGGCCCCTCTCTCATGACAGTTTTTATTGTATTTGGAGGTTACTATGTCAATCCTGAGAATACCCCAATCATCTTCCGCTGGATTCCTAATGTTTCTCTGATTAGATGGGCTTTTCAGGGACTTTCTATCAATGAATTTAGTGGTCTTCAATTTGACCATCAAAATTCATTTGATATTCAAACTGGAGAACAGGCACTAGAGCGTATTTCCTTTGGAAAAAGTAGGATTAGGGCTACGGTGATAGCACAAAATAGAATACTGCTATTTTGGTATTGCACCACCTACCTTCTCCTGGAGAAAAACAAGCCCAAATACCAGCAACTTGAAAGCCCTATTGACCACAACAAACCGCATTTAAAAATTGAGGAGCTCAATTCTGAACAAGTTGATCAGACACTTGAAGCTCCGCCACTGCCAGTCAACCAAGTTGATTCCAACCAGCCCCTTGCGTCACCTGAAGCTGAAGTAGATCTTGTTGGCCCTTTTGTCCTCGAAGGCAATTTGTTGCGGCTTAGTGCACCACACAAGGTGCTCACTAATACCACCACCACTCCTAGGAGGAGTTTAATCTATGCATCAAAAAGAGACTCTTTTGGGCACCATTATGATGGCAAGTTGGTGGATGAGAACATGATCCTTCTTAGAATGCGAATCCGTGAGATTGAGATGCTGGAAATGAAGGGTAAAGCTACTTCCGATTGGACTGAATGGGAGAAAAAGTATTTTGAGAATTATGATTCGGATGTATGTGAAGCAGTTGGATTGTTGCAAAGAGTGTTAATGAACACTAGACCTTCTTTTGCACTGGGCATGCTAGCTCTGGTTATGTTAAGCATGTCCATGTCAACGTTGCAAGTTGGGTTTCATTTAGTAGAATTTGCCAAGGGAATCATATGA 2580 0.445 MAGFGGKKVHQMIVGFGGSGLGQVVIAVAVSFLVRVFSAPGPAPSPENDADDVPENDSGDAEAPTVGKVTPVTIRWRNINCSISDKSSKSVRFLLKNVSGEAKPGRLLAIMGPSGSGKTTLLNVLAGQLTASPRLHLSGVLEFNGKPGSKNTYKFAYVRQEDLFFSQLTVRETLSLATELQLPNISSAEERDEFVNNLLFKLGLVSCADTNVGDAKVRGISGGEKKRLSLACELLASPSVIFADEPTTGLDAFQAEKVMETLQQLAQDGHTVICSIHQPRGSVYSKFDDIILLTEGSLVYAGPARYEPLAYFSKFGYQCPDHINPAEFLADLISIDYSSADSVYTSQKRIDGLVESFSQRQSAVIYATPITINDISNSRKKISQRAVVKKKGVWWKQFWLLLKRAWMQASRDAPTNKVRARMSIASAIIFGSVFWRMGNSQTSIQDRMGLLQVTAINTAMAALTKTVGVFPKERAIVDRERAKGSYSLGPYLFSKLLAEIPIGAAFPLMFGAVLYPMARLHPTFRRFGKFCGIVTMESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNPENTPIIFRWIPNVSLIRWAFQGLSINEFSGLQFDHQNSFDIQTGEQALERISFGKSRIRATVIAQNRILLFWYCTTYLLLEKNKPKYQQLESPIDHNKPHLKIEELNSEQVDQTLEAPPLPVNQVDSNQPLASPEAEVDLVGPFVLEGNLLRLSAPHKVLTNTTTTPRRSLIYASKRDSFGHHYDGKLVDENMILLRMRIREIEMLEMKGKATSDWTEWEKKYFENYDSDVCEAVGLLQRVLMNTRPSFALGMLALVMLSMSMSTLQVGFHLVEFAKGII 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00600 859 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 304 IPR027417 -
Pumo3g00600 859 SMART AAA_5 104 297 IPR003593 GO:0016887
Pumo3g00600 859 MobiDBLite consensus disorder prediction 41 67 - -
Pumo3g00600 859 ProSitePatterns ABC transporters family signature. 220 234 IPR017871 GO:0005524|GO:0016887
Pumo3g00600 859 Pfam ABC-2 type transporter 397 607 IPR013525 GO:0016020|GO:0140359
Pumo3g00600 859 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 74 320 IPR003439 GO:0005524
Pumo3g00600 859 FunFam ABC transporter G family member 7 72 310 - -
Pumo3g00600 859 Pfam ABC transporter 95 247 IPR003439 GO:0005524
Pumo3g00600 859 Gene3D - 68 308 IPR027417 -
Pumo3g00600 859 Pfam ABC-2 type transporter 277 349 IPR043926 GO:0140359
Pumo3g00600 859 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 62 625 - -
Pumo3g00600 859 CDD ABCG_EPDR 71 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00600 Pumo-Chr3 9060029 9069505 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00600 94 302 Calmodulin-binding Proteins AT2G36910 28.169 1.14e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00600 K05681 - gmx:100788256 1371.3