Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00531 ATGGAAACCCAACTTGACTACAAAACTAAAAGAGCAAACCCCACTTCCCCAACGCGCTTGAAGCTCTTTGGGTTCAGCGTACACCACGAAGACATCATGGAAGAAGACGAGGTGGTGCTGCATGATGACGTGGCAGACTCCCCCACCAAGGCGACCTCCACTTCCCCTTCCCCATCTAACTCGCCGGACTCGTCCCTCGCCGGCGCCGGACCTCCTTCCTCCGGCGACCGGAAATACGAGTGCCAATACTGCTGCCGAGAGTTCGCAAATTCACAAGCACTTGGCGGACACCAGAACGCGCACAAGAAGGAGCGTCAGCAACTGAAGCGCGCGCAGTTACAAGCCACTCGAAACGCCGCCGTTTCGTTCGTGCGGAACCCGATGATCTCCGCCTTCGCCCCTCCGCCGCACCTGCTGGCTCCACCGGGGTCCGTGATGGTCCCGGCTGCCGCGCCATCGTGGGTGTACGTGCCGCCACGTGCCGCGCCTCCTCCCTTCCACGTGTCAGTGTCGCACGGTTGTGCGTTCCCGTCGGCGCATGGCAACAACAACGGCTTCAGTAGTAGCAATAATAGCAGCAATAGTAACGTGACCATAACGGGTGTGAAATCTGCGGGTGCAGGGATGTTTCCCTATGTTGGCGTTGTAGCAGATTCGTCATTAGCTTTGTCAACGGTGCAGGTTCAGGCCCGGGCCCACCATGCTACCATTGATGGGCCCTCTTTGAGTAGGTTTTCCAAAGGTGACGGTGGGCCCAAATTTGATGATGCATGGGGCTTGGACTTGCATCTTAGTCTTCCGCCAGCTGCGCCGTGA 816 0.5821 METQLDYKTKRANPTSPTRLKLFGFSVHHEDIMEEDEVVLHDDVADSPTKATSTSPSPSNSPDSSLAGAGPPSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFVRNPMISAFAPPPHLLAPPGSVMVPAAAPSWVYVPPRAAPPPFHVSVSHGCAFPSAHGNNNGFSSSNNSSNSNVTITGVKSAGAGMFPYVGVVADSSLALSTVQVQARAHHATIDGPSLSRFSKGDGGPKFDDAWGLDLHLSLPPAAP 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00531 271 FunFam Zinc finger protein GIS3 67 129 - -
Pumo3g00531 271 SUPERFAMILY beta-beta-alpha zinc fingers 75 106 IPR036236 -
Pumo3g00531 271 PANTHER ZINC FINGER PROTEIN 5 11 270 IPR044299 GO:0010090
Pumo3g00531 271 MobiDBLite consensus disorder prediction 37 74 - -
Pumo3g00531 271 MobiDBLite consensus disorder prediction 47 68 - -
Pumo3g00531 271 ProSitePatterns Zinc finger C2H2 type domain signature. 81 101 IPR013087 -
Pumo3g00531 271 Gene3D Classic Zinc Finger 63 126 - -
Pumo3g00531 271 ProSiteProfiles Zinc finger C2H2 type domain profile. 79 106 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00531 Pumo-Chr3 7780095 7781202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00531 4 270 C2H2 Transcription Factor Family AT1G68360 44.964 5.21e-53 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00531 - - gmx:102663095 447.973