Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00519 ATGGACGCCTCCTTCCACCGCCGCAAGGACAAGGTGGTGGTCATCATGGGCGCCACCGGGTCCGGCAAGTCGCGCCTCTCCATCGACCTGGCAACCCTCTTCCCCTCCTCCGAAATCATCAACTCAGACAAAATGCAAGTGTACCGCGGCCTCGACATAACCACAAACAAGATCCCCCACGCCCAGCGCCGCGGCGTCCCCCACCACCTCCTCGGCGACGTTGACCCCGACCTCGGCGAGTTCTCCCCCGCCGACTTCCGCCACCGCGCCGCCGACCTCATCGCTGACATCACCCGCCGGAGAAACCTCCCTATCCTCGTCGGCGGCTCCAACTCCTTCGTCCACGCCCTCCTCGTCCAAAACTTCCACCCTCATCAAGAAGGCCTTATATCCTCTGAGTTGAGGTACAGGTGTTGCTTCCTCTGGGTCGACATAGCCTTCCCCGTGTTATCGCAATATTTGCGCCACCGAGTCGACGACATGCTTCACTCGGGGATGGTCGACGAGTTGGCTCACTTCTTCGACCCGGACGCGGCCCGTCGAACCGGGCTCGGTCTCGGTCTCAGAAAGGCCATTGGGGTTCCCGAGTTCGACCGGTTTTTTAATAAATACCCGCCCACGATGGGCCCGGGCAATGATCCTCTGCGGGAGCGTGCGTACGAGGAAGCGGTCCAGGCGATTAAGGATAACACGTGCGAGTTGGCGGAGCGTCAGATAGGGAAGATCGAACGGTTGAAGCGCGCCGGCTGGGACCTACGGAGGATCGACGCGACGGAGGCGTTTCGGGTTGTGATGACGTCAGGGTCCGATGTATGGGAGAGACAGGTGTTGGAACCAAGCGTGAAGATTGTGAAACGCTTCTTGATGGAGTAG 873 0.6048 MDASFHRRKDKVVVIMGATGSGKSRLSIDLATLFPSSEIINSDKMQVYRGLDITTNKIPHAQRRGVPHHLLGDVDPDLGEFSPADFRHRAADLIADITRRRNLPILVGGSNSFVHALLVQNFHPHQEGLISSELRYRCCFLWVDIAFPVLSQYLRHRVDDMLHSGMVDELAHFFDPDAARRTGLGLGLRKAIGVPEFDRFFNKYPPTMGPGNDPLRERAYEEAVQAIKDNTCELAERQIGKIERLKRAGWDLRRIDATEAFRVVMTSGSDVWERQVLEPSVKIVKRFLME 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00519 290 Gene3D - 9 288 IPR027417 -
Pumo3g00519 290 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 13 125 IPR027417 -
Pumo3g00519 290 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 9 288 IPR039657 -
Pumo3g00519 290 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 147 252 - -
Pumo3g00519 290 Pfam IPP transferase 131 239 - -
Pumo3g00519 290 Pfam IPP transferase 46 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00519 Pumo-Chr3 7631573 7632756 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00519 99 288 C2H2 Transcription Factor Family AT2G27760 27.907 3.76e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00519 K10760 - gmx:100813761 509.99