Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00516 ATGGGCTTAAAGGGAAAGAAGGGTGTCATGGAAGTTGCTTTAATTGGATGGTTATGGTTGCAGGTTGCAGGAAAAAGAAAAGCGGCGGGAAGGATGGAAAAGACGAAGAGGGAAACGGAGACACTGAACCAGGCTCGTCAACTGGTCTTTCGTAGCGATCATAACCTTGTTGCACAAGGTGCCCCTCACTTAGGATGCTGCCAACCAATAGGAACGGGAAGTTATCATCCACCAGGAGATCCAACAGTGCCGCTGAGATTCCCGAGATACTTCTCAGGTTCATCCTCAACTCACATGCCACCACCCCCACCTCCACCACCACCTCCACAACCATATCTATACGCTTCACCTACGAGGCCAGTGTCTTTTGGGTCATCACACTTCCCTCACCACGATTACTATGTGGGTCACGTGATGAGTGGTGGCAGCCACGGACACTATGTGGGAGGTGGAGGAGGAGGAGAGAGTACAAGTAGTTACACGTGCATTGGTGCACCGGTGGGACAAGGTGGTGGCAAGGAGGGGTCAGTGCAGGAGGAAGGGTTGAGTTGGGGAAGGAGCTATTCAGGAGCACAGCATCGTTTGGATCCTCCCTCAGCGATCAATCGGTTTCAAGATGGTTTCTAA 627 0.5183 MGLKGKKGVMEVALIGWLWLQVAGKRKAAGRMEKTKRETETLNQARQLVFRSDHNLVAQGAPHLGCCQPIGTGSYHPPGDPTVPLRFPRYFSGSSSTHMPPPPPPPPPPQPYLYASPTRPVSFGSSHFPHHDYYVGHVMSGGSHGHYVGGGGGGESTSSYTCIGAPVGQGGGKEGSVQEEGLSWGRSYSGAQHRLDPPSAINRFQDGF 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00516 208 MobiDBLite consensus disorder prediction 188 208 - -
Pumo3g00516 208 MobiDBLite consensus disorder prediction 97 111 - -
Pumo3g00516 208 MobiDBLite consensus disorder prediction 77 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00516 Pumo-Chr3 7548200 7549332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00516 4 171 C2H2 Transcription Factor Family AT1G13400 34.286 1.10e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00516 - - gmx:102661548 248.825