Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pumo3g00502 ATGGGAAAAGGGAATAAACCTGATAGACCTAAAAGCCAAAACAATACTAGGATGTTAACGCCGAAGCTAGGAAAAACCCAAAGCAAAATGTGCGTACAAGTTCAACTCGTGCTTCACAGTTGGCTTAAACTAACCATAACATGCTTCGGTTATATGGACTTCTGCAATTTCAATGAACAACCATCGAATAAACGGAAAATAGAAATTAGGGTTCACTTGGTTCAGGAACGATTATGGTTGAAGCTTCTGGATCACTACGGGATACGGGAAAGGGAAAGGGAAGCACTGCCATGGAAGAAAAGGGTAGAGATCTGCATAGGAGCAGCGCGTGGACTACACTACCTTCACACAGGAGCCAAGCGCTCCATCTTTCACCGCAACATCACTGCCAACAGCATTCTTTTGGATCAACACATGGAACCAAGACTCGCAGCTTTCAGCATTAGCGTACAAGGACCACGTTTTATGTCAAAGCCTAAACCAATTAAAGTAGATCCCGCCGGTACTTTTGGCTACATGGCTGTGGAACATCTCAGGGACGGTACCATCACAGATAAATGTGATGTTTACTCGTTTGGTGTGGTTCTACTGGAAGTTGTGTGTGGAAGGAACTATTTCAGAATGCCATCAGAAACAGTACTTATGGAGAAGCCTGTTGAGGAGAACATTGATCCGAATATCAAAGGAAATATTGCACCAGAGTGTTGGCAAGTCTTTATAGATATCACCGTGAGATGCTTGAAGTATGAACCAGATGAGCGACCATCAATTGGCGAAGTGGAGGTGGAACTTGAGCATGCTCTGTCATTGCAAGCGAAAGCAGATATCAGAAACACCAATGGTGATTATACATTGTTGTCCAAAACCATTATTAAGCTTGGACCGGAATGA 891 0.4343 MGKGNKPDRPKSQNNTRMLTPKLGKTQSKMCVQVQLVLHSWLKLTITCFGYMDFCNFNEQPSNKRKIEIRVHLVQERLWLKLLDHYGIREREREALPWKKRVEICIGAARGLHYLHTGAKRSIFHRNITANSILLDQHMEPRLAAFSISVQGPRFMSKPKPIKVDPAGTFGYMAVEHLRDGTITDKCDVYSFGVVLLEVVCGRNYFRMPSETVLMEKPVEENIDPNIKGNIAPECWQVFIDITVRCLKYEPDERPSIGEVEVELEHALSLQAKADIRNTNGDYTLLSKTIIKLGPE 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pumo3g00502 296 PANTHER OS07G0166700 PROTEIN 73 271 IPR045272 GO:0004714|GO:0006468
Pumo3g00502 296 MobiDBLite consensus disorder prediction 1 20 - -
Pumo3g00502 296 Gene3D Transferase(Phosphotransferase) domain 1 81 288 - -
Pumo3g00502 296 FunFam Receptor-like protein kinase ANXUR2 82 286 - -
Pumo3g00502 296 SUPERFAMILY Protein kinase-like (PK-like) 70 263 IPR011009 -
Pumo3g00502 296 Pfam Protein tyrosine and serine/threonine kinase 84 262 IPR001245 GO:0004672|GO:0006468
Pumo3g00502 296 ProSiteProfiles Protein kinase domain profile. 1 269 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pumo3g00502 Pumo-Chr3 7298804 7301245 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pumo3g00502 78 275 Receptor kinase-like Gene Family AT3G51550 39.437 6.02e-42 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pumo3g00502 PK_Tyr_Ser-Thr 2.7e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pumo3g00502 - - gmx:100781132 295.434